Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
U2AF1L4Q8WU68 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
U2AF1L4Q8WU68 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2AF1L4Q8WU68 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2AF1L4Q8WU68 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2AF1L4Q8WU68 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 PP12613-201ENST00000424958 2230 ntBASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AC241585.1-201ENST00000433527 519 ntBASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AC087163.2-201ENST00000457299 853 ntBASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AC002558.1-201ENST00000488906 803 ntBASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AC116407.2-201ENST00000613639 860 ntBASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AL161645.1-201ENST00000622716 1255 ntBASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AC084121.4-201ENST00000641598 221 ntBASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AF228730.8-201ENST00000642140 221 ntBASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AC139713.2-201ENST00000641328 2723 ntBASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 CU639417.3-201ENST00000624240 1404 ntBASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2AF1L4Q8WU68 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 MYCLP1-201ENST00000372451 1075 ntBASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 U91328.1-201ENST00000437528 223 ntBASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.23■□□□□ 0.67
U2AF1L4Q8WU68 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 AL645608.8-201ENST00000606034 2086 ntBASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 IGHV3-71-201ENST00000523324 359 ntBASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.22■□□□□ 0.67
U2AF1L4Q8WU68 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms