Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TMC1Q8TDI8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TMC1Q8TDI8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 AL671277.1-201ENST00000429656 993 ntBASIC23.39■■□□□ 1.33
TMC1Q8TDI8 HMGN1P19-201ENST00000436976 333 ntBASIC23.39■■□□□ 1.33
TMC1Q8TDI8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 AC004835.2-201ENST00000603762 682 ntBASIC23.39■■□□□ 1.33
TMC1Q8TDI8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMC1Q8TDI8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 AL121761.2-201ENST00000598007 1648 ntBASIC23.38■■□□□ 1.33
TMC1Q8TDI8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 PON3-203ENST00000427422 894 ntTSL 3 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 ADH5P3-201ENST00000433842 1137 ntBASIC23.38■■□□□ 1.33
TMC1Q8TDI8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 FRMD8P1-201ENST00000440433 1524 ntBASIC23.38■■□□□ 1.33
TMC1Q8TDI8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMC1Q8TDI8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 AL139400.1-201ENST00000366220 510 ntBASIC23.37■■□□□ 1.33
TMC1Q8TDI8 AL355306.1-201ENST00000415580 579 ntBASIC23.37■■□□□ 1.33
TMC1Q8TDI8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC23.37■■□□□ 1.33
TMC1Q8TDI8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
TMC1Q8TDI8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 SLC22A20-204ENST00000530038 1673 ntBASIC23.36■■□□□ 1.33
TMC1Q8TDI8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 TSEN15P1-201ENST00000423257 515 ntBASIC23.36■■□□□ 1.33
TMC1Q8TDI8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 KRT8P48-201ENST00000515599 1220 ntBASIC23.36■■□□□ 1.33
TMC1Q8TDI8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 AC093028.1-201ENST00000622998 982 ntBASIC23.36■■□□□ 1.33
TMC1Q8TDI8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMC1Q8TDI8 AL353732.1-201ENST00000569618 1459 ntBASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms