Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC133963.1-201ENST00000504166 1679 ntBASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC092506.1-202ENST00000401022 528 ntBASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC005695.3-201ENST00000614522 232 ntBASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC007969.1-201ENST00000433675 447 ntBASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 GOLGA2P4-201ENST00000441462 777 ntBASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 RPL13AP20-201ENST00000459725 609 ntBASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC036164.1-201ENST00000570544 333 ntBASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 AP000812.2-201ENST00000538934 718 ntBASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 MEP1AP4-201ENST00000423244 1087 ntBASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 MIR3615-201ENST00000581999 87 ntBASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 RRP7BP-205ENST00000566851 833 ntBASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 AC020765.3-201ENST00000613051 740 ntBASIC11.12□□□□□ -0.63
ALMS1Q8TCU4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms