Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.83■□□□□ 0.77
NKX2-3Q8TAU0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NKX2-3Q8TAU0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 GAPDHP21-201ENST00000450301 1010 ntBASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 AC093214.1-201ENST00000511688 1107 ntBASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 AC099522.2-201ENST00000607001 744 ntBASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 AC092902.6-201ENST00000641783 218 ntBASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 LINC00895-201ENST00000629028 1637 ntBASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NKX2-3Q8TAU0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 AC093520.2-201ENST00000561830 333 ntBASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 AC005412.3-201ENST00000580309 715 ntBASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 AL512652.2-201ENST00000625156 1716 ntBASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-3Q8TAU0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.8■□□□□ 0.76
NKX2-3Q8TAU0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms