Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 GOLGA2P5-201ENST00000266746 2395 ntBASIC10.4□□□□□ -0.74
SVIPQ8NHG7 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SVIPQ8NHG7 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SVIPQ8NHG7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SVIPQ8NHG7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SVIPQ8NHG7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
SVIPQ8NHG7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
SVIPQ8NHG7 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SVIPQ8NHG7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC10.4□□□□□ -0.75
SVIPQ8NHG7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SVIPQ8NHG7 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SVIPQ8NHG7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SVIPQ8NHG7 FP325332.1-201ENST00000624818 2045 ntBASIC10.4□□□□□ -0.75
SVIPQ8NHG7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 AC008663.2-201ENST00000517299 1777 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 AC104417.2-201ENST00000562989 1793 ntBASIC10.39□□□□□ -0.75
SVIPQ8NHG7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 TMEM150C-204ENST00000515780 3296 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 SLC25A6P5-201ENST00000435663 894 ntBASIC10.39□□□□□ -0.75
SVIPQ8NHG7 ACTG1P22-201ENST00000603793 1099 ntBASIC10.39□□□□□ -0.75
SVIPQ8NHG7 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 NCF2-202ENST00000367536 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 POC5-213ENST00000514838 1984 ntTSL 5 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 PLEK-201ENST00000234313 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 CLDN10-203ENST00000376873 2656 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.39□□□□□ -0.75
SVIPQ8NHG7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 PRAMEF9-201ENST00000415919 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 MX1-201ENST00000288383 2733 ntTSL 2 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 PDE4C-203ENST00000447275 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 AL031009.1-201ENST00000624137 2182 ntBASIC10.38□□□□□ -0.75
SVIPQ8NHG7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SVIPQ8NHG7 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms