Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.63□□□□□ -0.39
NUP35Q8NFH5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.63□□□□□ -0.39
NUP35Q8NFH5 REXO1L10P-201ENST00000615707 1290 ntBASIC12.63□□□□□ -0.39
NUP35Q8NFH5 REXO1L12P-201ENST00000622156 912 ntBASIC12.63□□□□□ -0.39
NUP35Q8NFH5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 AC010460.3-201ENST00000511359 1579 ntBASIC12.63□□□□□ -0.39
NUP35Q8NFH5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NUP35Q8NFH5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 AL135905.2-201ENST00000584934 1404 ntBASIC12.62□□□□□ -0.39
NUP35Q8NFH5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 ID1-201ENST00000376105 1233 ntBASIC12.62□□□□□ -0.39
NUP35Q8NFH5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 AC009947.2-201ENST00000444014 672 ntBASIC12.62□□□□□ -0.39
NUP35Q8NFH5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 AC116562.4-202ENST00000641738 218 ntBASIC12.62□□□□□ -0.39
NUP35Q8NFH5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 PPT1-215ENST00000641471 2368 ntBASIC12.62□□□□□ -0.39
NUP35Q8NFH5 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.62□□□□□ -0.39
NUP35Q8NFH5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.61□□□□□ -0.39
NUP35Q8NFH5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms