Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COLGALT1Q8NBJ5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.11■□□□□ 0.49
COLGALT1Q8NBJ5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COLGALT1Q8NBJ5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COLGALT1Q8NBJ5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COLGALT1Q8NBJ5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.11■□□□□ 0.49
COLGALT1Q8NBJ5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.11■□□□□ 0.49
COLGALT1Q8NBJ5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COLGALT1Q8NBJ5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COLGALT1Q8NBJ5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 AC020916.1-201ENST00000587762 1774 ntBASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 MIR661-201ENST00000384842 89 ntBASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 AC002472.2-201ENST00000442739 958 ntBASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 UGT1A2P-201ENST00000454886 866 ntBASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 SLC25A39P2-201ENST00000537614 270 ntBASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 RN7SL204P-201ENST00000582831 262 ntBASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 AF228730.6-201ENST00000641497 218 ntBASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 AC084121.3-201ENST00000641716 218 ntBASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 AC105233.6-201ENST00000642093 218 ntBASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLGALT1Q8NBJ5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 AL023806.1-201ENST00000603994 1649 ntBASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 AC106820.2-201ENST00000563775 3264 ntBASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 RNU1-129P-201ENST00000384064 167 ntBASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 AC015922.1-201ENST00000421102 1152 ntBASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 TERF1P3-201ENST00000505638 1227 ntBASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 IGHV3-42-201ENST00000520410 361 ntBASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 U1.21-201ENST00000580816 167 ntBASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 AL031055.1-201ENST00000606362 631 ntBASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 AL390754.1-201ENST00000619088 582 ntBASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COLGALT1Q8NBJ5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
COLGALT1Q8NBJ5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COLGALT1Q8NBJ5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.08■□□□□ 0.49
COLGALT1Q8NBJ5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
COLGALT1Q8NBJ5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.08■□□□□ 0.49
COLGALT1Q8NBJ5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COLGALT1Q8NBJ5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COLGALT1Q8NBJ5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COLGALT1Q8NBJ5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.08■□□□□ 0.48
COLGALT1Q8NBJ5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.08■□□□□ 0.48
COLGALT1Q8NBJ5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COLGALT1Q8NBJ5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms