Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRTM2Q8N967 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.79□□□□□ -0.2
LRTM2Q8N967 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRTM2Q8N967 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 AC073592.5-201ENST00000624854 528 ntBASIC13.78□□□□□ -0.2
LRTM2Q8N967 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LRTM2Q8N967 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRTM2Q8N967 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRTM2Q8N967 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.77□□□□□ -0.2
LRTM2Q8N967 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRTM2Q8N967 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRTM2Q8N967 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.77□□□□□ -0.2
LRTM2Q8N967 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
LRTM2Q8N967 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRTM2Q8N967 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRTM2Q8N967 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 NUS1P1-201ENST00000446295 882 ntBASIC13.77□□□□□ -0.21
LRTM2Q8N967 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 AC009533.2-201ENST00000543664 586 ntBASIC13.77□□□□□ -0.21
LRTM2Q8N967 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 AC011558.1-201ENST00000623459 338 ntBASIC13.77□□□□□ -0.21
LRTM2Q8N967 AC097637.2-201ENST00000624096 1997 ntBASIC13.77□□□□□ -0.21
LRTM2Q8N967 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.77□□□□□ -0.21
LRTM2Q8N967 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRTM2Q8N967 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms