Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.16□□□□□ -0.3
C3orf56Q8N813 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C3orf56Q8N813 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
C3orf56Q8N813 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
C3orf56Q8N813 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
C3orf56Q8N813 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
C3orf56Q8N813 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C3orf56Q8N813 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C3orf56Q8N813 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.16□□□□□ -0.3
C3orf56Q8N813 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
C3orf56Q8N813 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
C3orf56Q8N813 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
C3orf56Q8N813 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C3orf56Q8N813 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C3orf56Q8N813 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C3orf56Q8N813 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.16□□□□□ -0.3
C3orf56Q8N813 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 MIR658-201ENST00000385210 100 ntBASIC13.15□□□□□ -0.3
C3orf56Q8N813 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 TSSK5P-201ENST00000423978 907 ntBASIC13.15□□□□□ -0.3
C3orf56Q8N813 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 RAB43P1-201ENST00000561790 589 ntBASIC13.15□□□□□ -0.3
C3orf56Q8N813 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.15□□□□□ -0.3
C3orf56Q8N813 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.15□□□□□ -0.3
C3orf56Q8N813 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C3orf56Q8N813 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.15□□□□□ -0.31
C3orf56Q8N813 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 MIR346-201ENST00000362234 95 ntBASIC13.14□□□□□ -0.31
C3orf56Q8N813 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 AL512384.1-201ENST00000406683 331 ntBASIC13.14□□□□□ -0.31
C3orf56Q8N813 MIR1909-201ENST00000411312 80 ntBASIC13.14□□□□□ -0.31
C3orf56Q8N813 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 INE1-201ENST00000456273 945 ntBASIC13.14□□□□□ -0.31
C3orf56Q8N813 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 AC010336.2-201ENST00000564226 506 ntBASIC13.14□□□□□ -0.31
C3orf56Q8N813 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.14□□□□□ -0.31
C3orf56Q8N813 AL138828.2-201ENST00000615812 383 ntBASIC13.14□□□□□ -0.31
C3orf56Q8N813 AL162274.1-201ENST00000617191 1098 ntBASIC13.14□□□□□ -0.31
C3orf56Q8N813 SPDYE12P-201ENST00000618416 771 ntBASIC13.14□□□□□ -0.31
C3orf56Q8N813 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C3orf56Q8N813 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms