Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.37■□□□□ 0.37
PAF1Q8N7H5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PAF1Q8N7H5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 AL022342.1-201ENST00000400363 863 ntBASIC17.36■□□□□ 0.37
PAF1Q8N7H5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 AC117500.6-201ENST00000624871 588 ntBASIC17.36■□□□□ 0.37
PAF1Q8N7H5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 ZNF259P1-201ENST00000407656 1365 ntBASIC17.36■□□□□ 0.37
PAF1Q8N7H5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAF1Q8N7H5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 MIR940-201ENST00000401276 94 ntBASIC17.35■□□□□ 0.37
PAF1Q8N7H5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 RPL13AP23-201ENST00000480739 586 ntBASIC17.35■□□□□ 0.37
PAF1Q8N7H5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 GPR89P-201ENST00000407924 1495 ntBASIC17.35■□□□□ 0.37
PAF1Q8N7H5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 PP12613-201ENST00000424958 2230 ntBASIC17.35■□□□□ 0.37
PAF1Q8N7H5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PAF1Q8N7H5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 AC012313.1-201ENST00000593393 3059 ntBASIC17.34■□□□□ 0.37
PAF1Q8N7H5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 PTCHD3P3-201ENST00000403073 906 ntBASIC17.34■□□□□ 0.37
PAF1Q8N7H5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 AC108751.1-201ENST00000490852 363 ntBASIC17.34■□□□□ 0.37
PAF1Q8N7H5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms