Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL078644.1-201ENST00000609881 752 ntBASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC33Q8N5R6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC33Q8N5R6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CCDC33Q8N5R6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC33Q8N5R6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CCDC33Q8N5R6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC33Q8N5R6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 HTR5BP-201ENST00000430851 1154 ntBASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 PRSS29P-201ENST00000440800 595 ntBASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 AP006288.1-201ENST00000446065 395 ntBASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 AC105020.1-201ENST00000435356 2205 ntBASIC17.7■□□□□ 0.42
CCDC33Q8N5R6 GPR89P-201ENST00000407924 1495 ntBASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 AC092171.3-201ENST00000610122 2651 ntBASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 PTCHD3P3-201ENST00000403073 906 ntBASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 METTL21AP1-201ENST00000438852 635 ntBASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 FLJ38576-201ENST00000623820 2459 ntBASIC17.69■□□□□ 0.42
CCDC33Q8N5R6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 CROCCP1-201ENST00000426910 5675 ntBASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 MRPL20P1-201ENST00000400819 433 ntBASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC33Q8N5R6 C20orf181-201ENST00000623918 480 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms