Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.21■□□□□ 0.35
SIX5Q8N196 AL031055.1-201ENST00000606362 631 ntBASIC17.21■□□□□ 0.35
SIX5Q8N196 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.21■□□□□ 0.35
SIX5Q8N196 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SIX5Q8N196 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.21■□□□□ 0.35
SIX5Q8N196 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SIX5Q8N196 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SIX5Q8N196 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIX5Q8N196 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.21■□□□□ 0.35
SIX5Q8N196 KRT18P55-202ENST00000578578 1546 ntBASIC17.21■□□□□ 0.34
SIX5Q8N196 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SIX5Q8N196 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SIX5Q8N196 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SIX5Q8N196 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SIX5Q8N196 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.34
SIX5Q8N196 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.2■□□□□ 0.34
SIX5Q8N196 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 AC016027.1-202ENST00000607927 1699 ntBASIC17.2■□□□□ 0.34
SIX5Q8N196 AC138969.3-201ENST00000546612 1459 ntBASIC17.2■□□□□ 0.34
SIX5Q8N196 AC138932.2-201ENST00000548268 1459 ntBASIC17.2■□□□□ 0.34
SIX5Q8N196 AC126755.4-201ENST00000549796 1459 ntBASIC17.2■□□□□ 0.34
SIX5Q8N196 AL353732.1-201ENST00000569618 1459 ntBASIC17.2■□□□□ 0.34
SIX5Q8N196 AC007541.1-201ENST00000570282 1469 ntBASIC17.2■□□□□ 0.34
SIX5Q8N196 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SIX5Q8N196 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SIX5Q8N196 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 RNU1-129P-201ENST00000384064 167 ntBASIC17.2■□□□□ 0.34
SIX5Q8N196 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.2■□□□□ 0.34
SIX5Q8N196 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SIX5Q8N196 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.2■□□□□ 0.34
SIX5Q8N196 U1.21-201ENST00000580816 167 ntBASIC17.2■□□□□ 0.34
SIX5Q8N196 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SIX5Q8N196 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.2■□□□□ 0.34
SIX5Q8N196 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 AC018470.1-201ENST00000624790 3129 ntBASIC17.2■□□□□ 0.34
SIX5Q8N196 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SIX5Q8N196 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.2■□□□□ 0.34
SIX5Q8N196 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.2■□□□□ 0.34
SIX5Q8N196 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.2■□□□□ 0.34
SIX5Q8N196 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.19■□□□□ 0.34
SIX5Q8N196 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.19■□□□□ 0.34
SIX5Q8N196 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.19■□□□□ 0.34
SIX5Q8N196 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.19■□□□□ 0.34
SIX5Q8N196 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.19■□□□□ 0.34
SIX5Q8N196 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SIX5Q8N196 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 AC139713.2-201ENST00000641328 2723 ntBASIC17.19■□□□□ 0.34
SIX5Q8N196 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.19■□□□□ 0.34
SIX5Q8N196 HCG4-201ENST00000418983 998 ntBASIC17.19■□□□□ 0.34
SIX5Q8N196 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SIX5Q8N196 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.19■□□□□ 0.34
SIX5Q8N196 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.19■□□□□ 0.34
SIX5Q8N196 AC010336.2-201ENST00000564226 506 ntBASIC17.19■□□□□ 0.34
SIX5Q8N196 RARRES2P9-201ENST00000565168 469 ntBASIC17.19■□□□□ 0.34
SIX5Q8N196 AL138918.1-201ENST00000568306 659 ntBASIC17.19■□□□□ 0.34
SIX5Q8N196 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms