Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AC016396.2-201ENST00000562575 1417 ntBASIC17.13■□□□□ 0.33
CHPFQ8IZ52 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 SPCS2P1-201ENST00000561636 679 ntBASIC17.12■□□□□ 0.33
CHPFQ8IZ52 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 Z92544.3-201ENST00000624747 417 ntBASIC17.12■□□□□ 0.33
CHPFQ8IZ52 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 TOP3BP1-201ENST00000420768 1380 ntBASIC17.12■□□□□ 0.33
CHPFQ8IZ52 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHPFQ8IZ52 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 AC069335.1-201ENST00000489972 472 ntBASIC17.11■□□□□ 0.33
CHPFQ8IZ52 AC067863.1-201ENST00000494933 530 ntBASIC17.11■□□□□ 0.33
CHPFQ8IZ52 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHPFQ8IZ52 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 SPCS2P4-201ENST00000436160 681 ntBASIC17.1■□□□□ 0.33
CHPFQ8IZ52 CNN2P2-201ENST00000443536 909 ntBASIC17.1■□□□□ 0.33
CHPFQ8IZ52 CNN2P3-201ENST00000450201 906 ntBASIC17.1■□□□□ 0.33
CHPFQ8IZ52 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.1■□□□□ 0.33
CHPFQ8IZ52 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CHPFQ8IZ52 AC109635.5-201ENST00000533593 962 ntBASIC17.1■□□□□ 0.33
CHPFQ8IZ52 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms