Protein–RNA interactions for Protein: Q8IWV8

UBR2, E3 ubiquitin-protein ligase UBR2, humanhuman

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2Q8IWV8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 SLC7A15P-201ENST00000424028 1363 ntBASIC21.07■□□□□ 0.96
UBR2Q8IWV8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 AC020765.3-201ENST00000613051 740 ntBASIC21.07■□□□□ 0.96
UBR2Q8IWV8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR2Q8IWV8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 OR8S1-201ENST00000310194 1080 ntBASIC21.06■□□□□ 0.96
UBR2Q8IWV8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 AL603756.1-201ENST00000606511 2163 ntBASIC21.06■□□□□ 0.96
UBR2Q8IWV8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 AL589702.1-201ENST00000641229 1509 ntBASIC21.06■□□□□ 0.96
UBR2Q8IWV8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.06■□□□□ 0.96
UBR2Q8IWV8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 RN7SL618P-201ENST00000477850 296 ntBASIC21.05■□□□□ 0.96
UBR2Q8IWV8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 AC139713.2-201ENST00000641328 2723 ntBASIC21.05■□□□□ 0.96
UBR2Q8IWV8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 AL645608.8-201ENST00000606034 2086 ntBASIC21.05■□□□□ 0.96
UBR2Q8IWV8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 AC027307.3-201ENST00000594262 1100 ntBASIC21.05■□□□□ 0.96
UBR2Q8IWV8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBR2Q8IWV8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 U91328.1-201ENST00000437528 223 ntBASIC21.04■□□□□ 0.96
UBR2Q8IWV8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 CR383656.12-201ENST00000549567 513 ntBASIC21.04■□□□□ 0.96
UBR2Q8IWV8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.04■□□□□ 0.96
UBR2Q8IWV8 AC007431.3-201ENST00000623221 587 ntBASIC21.04■□□□□ 0.96
UBR2Q8IWV8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBR2Q8IWV8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms