Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00346Q8IVM7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 AKR1C7P-201ENST00000305623 895 ntBASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 TERC-201ENST00000602385 541 ntBASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 AL589182.2-201ENST00000619332 1049 ntBASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 REXO1L6P-202ENST00000619970 1078 ntBASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 AC092364.2-201ENST00000596710 2692 ntBASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00346Q8IVM7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 AC008741.2-201ENST00000612792 3115 ntBASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 AC139887.3-201ENST00000568585 713 ntBASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 DOC2GP-204ENST00000639052 2548 ntBASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms