Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNGA4Q8IV77 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNGA4Q8IV77 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNGA4Q8IV77 AL596257.1-201ENST00000641463 2694 ntBASIC18.34■□□□□ 0.53
CNGA4Q8IV77 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CNGA4Q8IV77 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CNGA4Q8IV77 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 AL596087.1-201ENST00000400979 1969 ntBASIC18.33■□□□□ 0.53
CNGA4Q8IV77 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNGA4Q8IV77 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 AC004817.3-201ENST00000602957 2129 ntBASIC18.33■□□□□ 0.52
CNGA4Q8IV77 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNGA4Q8IV77 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 GGT3P-204ENST00000453783 1664 ntBASIC18.32■□□□□ 0.52
CNGA4Q8IV77 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 BX276092.5-203ENST00000456199 560 ntBASIC18.32■□□□□ 0.52
CNGA4Q8IV77 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 AL121672.3-201ENST00000608644 468 ntBASIC18.32■□□□□ 0.52
CNGA4Q8IV77 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 AP000867.4-201ENST00000641616 219 ntBASIC18.32■□□□□ 0.52
CNGA4Q8IV77 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNGA4Q8IV77 SIGLEC16-201ENST00000599858 1437 ntBASIC18.32■□□□□ 0.52
CNGA4Q8IV77 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNGA4Q8IV77 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms