Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 GNAS-203ENST00000306120 1878 ntBASIC17.63■□□□□ 0.41
CCDC149Q6ZUS6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 NOC2LP1-202ENST00000452600 2235 ntBASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC149Q6ZUS6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 AC241585.1-201ENST00000433527 519 ntBASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 KRT18P34-201ENST00000488218 1270 ntBASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 AP005018.1-201ENST00000525475 301 ntBASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 MIR4492-201ENST00000581627 80 ntBASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC149Q6ZUS6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 AC092580.3-201ENST00000430932 139 ntBASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC149Q6ZUS6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms