Protein–RNA interactions for Protein: Q6X4T0

C12orf54, Uncharacterized protein C12orf54, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54Q6X4T0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 OR8S1-201ENST00000310194 1080 ntBASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AC003669.1-201ENST00000334569 611 ntBASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AP002414.1-201ENST00000391405 1147 ntBASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 PTCHD3P3-201ENST00000403073 906 ntBASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AL512638.1-201ENST00000457493 794 ntBASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 RN7SL204P-201ENST00000582831 262 ntBASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AC009093.7-201ENST00000623853 1223 ntBASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AC068587.6-202ENST00000641839 5619 ntBASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf54Q6X4T0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 AL627223.1-201ENST00000416693 442 ntBASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 CXCL1P1-201ENST00000502804 216 ntBASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 IGHV3-42-201ENST00000520410 361 ntBASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf54Q6X4T0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms