Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CTR9Q6PD62 AC109635.5-201ENST00000533593 962 ntBASIC19.95■□□□□ 0.78
CTR9Q6PD62 SNHG9-202ENST00000564014 471 ntBASIC19.95■□□□□ 0.78
CTR9Q6PD62 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.95■□□□□ 0.78
CTR9Q6PD62 AP001350.2-201ENST00000625104 1094 ntBASIC19.95■□□□□ 0.78
CTR9Q6PD62 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.95■□□□□ 0.78
CTR9Q6PD62 AL513210.1-201ENST00000629608 234 ntBASIC19.95■□□□□ 0.78
CTR9Q6PD62 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CTR9Q6PD62 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CTR9Q6PD62 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTR9Q6PD62 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CTR9Q6PD62 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 CNN2P11-201ENST00000429351 262 ntBASIC19.94■□□□□ 0.78
CTR9Q6PD62 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 AC013467.2-201ENST00000605472 835 ntBASIC19.94■□□□□ 0.78
CTR9Q6PD62 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 AL031055.1-201ENST00000606362 631 ntBASIC19.94■□□□□ 0.78
CTR9Q6PD62 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 AC009053.2-201ENST00000563701 2365 ntBASIC19.94■□□□□ 0.78
CTR9Q6PD62 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 AC006277.1-201ENST00000624348 1610 ntBASIC19.94■□□□□ 0.78
CTR9Q6PD62 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CTR9Q6PD62 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTR9Q6PD62 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 AC004461.1-201ENST00000412461 403 ntBASIC19.93■□□□□ 0.78
CTR9Q6PD62 KRT8P48-201ENST00000515599 1220 ntBASIC19.93■□□□□ 0.78
CTR9Q6PD62 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 AC022145.2-201ENST00000598203 171 ntBASIC19.93■□□□□ 0.78
CTR9Q6PD62 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.93■□□□□ 0.78
CTR9Q6PD62 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTR9Q6PD62 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTR9Q6PD62 AL671710.1-201ENST00000610245 2349 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms