Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 AC124947.2-201ENST00000547118 1133 ntBASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 AC135050.7-201ENST00000624508 2218 ntBASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 AC006277.1-201ENST00000624348 1610 ntBASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 AL512361.1-201ENST00000554200 418 ntBASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 AC008494.3-201ENST00000606615 944 ntBASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNKSR3Q6P9H4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 SERBP1P3-201ENST00000459980 809 ntBASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 WASH4P-201ENST00000564273 1246 ntBASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 AC132938.2-201ENST00000579188 680 ntBASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 CHCHD2P3-201ENST00000603038 451 ntBASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 AL591163.1-201ENST00000641757 987 ntBASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.9■□□□□ 0.46
CNKSR3Q6P9H4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms