Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 AL627223.1-201ENST00000416693 442 ntBASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 SPCS2P4-201ENST00000436160 681 ntBASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 AC016027.1-202ENST00000607927 1699 ntBASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SWSAP1Q6NVH7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 AC023141.5-201ENST00000458585 616 ntBASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 AL645728.1-201ENST00000366221 2101 ntBASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SWSAP1Q6NVH7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 LINC00895-201ENST00000629028 1637 ntBASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 AL391256.1-201ENST00000443260 1855 ntBASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 AC069335.1-201ENST00000489972 472 ntBASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 LINC01225-203ENST00000563550 1244 ntBASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 AC004449.1-201ENST00000564240 433 ntBASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 AC021097.1-201ENST00000607902 574 ntBASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 AC093028.1-201ENST00000622998 982 ntBASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SWSAP1Q6NVH7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 SNX33P1-201ENST00000592116 1762 ntBASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms