Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.41□□□□□ -0.1
LRRK2Q5S007 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.41□□□□□ -0.1
LRRK2Q5S007 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.41□□□□□ -0.1
LRRK2Q5S007 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
LRRK2Q5S007 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
LRRK2Q5S007 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRK2Q5S007 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.41□□□□□ -0.1
LRRK2Q5S007 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.4□□□□□ -0.1
LRRK2Q5S007 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 AC138028.6-201ENST00000616106 1482 ntBASIC14.4□□□□□ -0.1
LRRK2Q5S007 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 SLC25A24P2-201ENST00000415059 510 ntBASIC14.4□□□□□ -0.1
LRRK2Q5S007 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRK2Q5S007 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.4□□□□□ -0.1
LRRK2Q5S007 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRK2Q5S007 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 AC004898.1-201ENST00000451057 766 ntBASIC14.39□□□□□ -0.11
LRRK2Q5S007 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 KRT8P22-201ENST00000562317 1415 ntBASIC14.39□□□□□ -0.11
LRRK2Q5S007 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.39□□□□□ -0.11
LRRK2Q5S007 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms