Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HLA-BQ31612 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-BQ31612 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-BQ31612 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-BQ31612 ARSEP1-201ENST00000420443 635 ntBASIC16.21■□□□□ 0.19
HLA-BQ31612 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-BQ31612 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-BQ31612 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-BQ31612 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-BQ31612 API5-211ENST00000534695 560 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-BQ31612 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-BQ31612 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-BQ31612 AC140912.1-201ENST00000577171 1054 ntBASIC16.21■□□□□ 0.19
HLA-BQ31612 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-BQ31612 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HLA-BQ31612 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-BQ31612 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-BQ31612 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-BQ31612 AC138969.3-201ENST00000546612 1459 ntBASIC16.21■□□□□ 0.19
HLA-BQ31612 AC138932.2-201ENST00000548268 1459 ntBASIC16.21■□□□□ 0.19
HLA-BQ31612 AC126755.4-201ENST00000549796 1459 ntBASIC16.21■□□□□ 0.19
HLA-BQ31612 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-BQ31612 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HLA-BQ31612 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-BQ31612 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
HLA-BQ31612 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
HLA-BQ31612 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-BQ31612 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-BQ31612 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-BQ31612 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-BQ31612 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HLA-BQ31612 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-BQ31612 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HLA-BQ31612 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HLA-BQ31612 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
HLA-BQ31612 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 HLA-V-201ENST00000429037 534 ntBASIC16.2■□□□□ 0.18
HLA-BQ31612 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-BQ31612 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-BQ31612 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-BQ31612 AC098859.1-201ENST00000502915 1238 ntBASIC16.2■□□□□ 0.18
HLA-BQ31612 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-BQ31612 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-BQ31612 AC105021.1-202ENST00000570572 669 ntBASIC16.2■□□□□ 0.18
HLA-BQ31612 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
HLA-BQ31612 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.2■□□□□ 0.18
HLA-BQ31612 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.2■□□□□ 0.18
HLA-BQ31612 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.2■□□□□ 0.18
HLA-BQ31612 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.2■□□□□ 0.18
HLA-BQ31612 AC004840.1-201ENST00000636359 365 ntBASIC16.2■□□□□ 0.18
HLA-BQ31612 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-BQ31612 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-BQ31612 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HLA-BQ31612 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HLA-BQ31612 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HLA-BQ31612 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HLA-BQ31612 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-BQ31612 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-BQ31612 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-BQ31612 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-BQ31612 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-BQ31612 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-BQ31612 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-BQ31612 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-BQ31612 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-BQ31612 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
HLA-BQ31612 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HLA-BQ31612 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-BQ31612 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-BQ31612 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-BQ31612 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HLA-BQ31612 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-BQ31612 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-BQ31612 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-BQ31612 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-BQ31612 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-BQ31612 U91328.1-201ENST00000437528 223 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms