Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RFX7Q2KHR2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 TIMM8BP1-201ENST00000452384 211 ntBASIC20.23■□□□□ 0.83
RFX7Q2KHR2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 AC015911.4-201ENST00000588022 1070 ntBASIC20.23■□□□□ 0.83
RFX7Q2KHR2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.23■□□□□ 0.83
RFX7Q2KHR2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.23■□□□□ 0.83
RFX7Q2KHR2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 RN7SL589P-201ENST00000481268 310 ntBASIC20.22■□□□□ 0.83
RFX7Q2KHR2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 AL135744.1-201ENST00000565098 629 ntBASIC20.22■□□□□ 0.83
RFX7Q2KHR2 AL031055.1-201ENST00000606362 631 ntBASIC20.22■□□□□ 0.83
RFX7Q2KHR2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 GGT4P-201ENST00000623672 1708 ntBASIC20.22■□□□□ 0.83
RFX7Q2KHR2 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.22■□□□□ 0.83
RFX7Q2KHR2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 GGT3P-204ENST00000453783 1664 ntBASIC20.22■□□□□ 0.83
RFX7Q2KHR2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX7Q2KHR2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX7Q2KHR2 GPS2P2-201ENST00000430745 888 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms