Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
GABPAQ06546 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.64■□□□□ 0.73
GABPAQ06546 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.64■□□□□ 0.73
GABPAQ06546 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
GABPAQ06546 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
GABPAQ06546 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
GABPAQ06546 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.64■□□□□ 0.73
GABPAQ06546 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
GABPAQ06546 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPAQ06546 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GABPAQ06546 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GABPAQ06546 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GABPAQ06546 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GABPAQ06546 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.63■□□□□ 0.73
GABPAQ06546 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GABPAQ06546 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 BCRP1-201ENST00000444246 691 ntBASIC19.63■□□□□ 0.73
GABPAQ06546 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.63■□□□□ 0.73
GABPAQ06546 AC105233.2-201ENST00000523697 349 ntBASIC19.63■□□□□ 0.73
GABPAQ06546 AF228730.5-201ENST00000530288 346 ntBASIC19.63■□□□□ 0.73
GABPAQ06546 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GABPAQ06546 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.63■□□□□ 0.73
GABPAQ06546 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
GABPAQ06546 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
GABPAQ06546 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
GABPAQ06546 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GABPAQ06546 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.62■□□□□ 0.73
GABPAQ06546 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
GABPAQ06546 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
GABPAQ06546 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.62■□□□□ 0.73
GABPAQ06546 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.62■□□□□ 0.73
GABPAQ06546 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
GABPAQ06546 AL391256.1-201ENST00000443260 1855 ntBASIC19.62■□□□□ 0.73
GABPAQ06546 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.62■□□□□ 0.73
GABPAQ06546 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
GABPAQ06546 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.62■□□□□ 0.73
GABPAQ06546 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.62■□□□□ 0.73
GABPAQ06546 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GABPAQ06546 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GABPAQ06546 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABPAQ06546 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GABPAQ06546 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABPAQ06546 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.61■□□□□ 0.73
GABPAQ06546 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABPAQ06546 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABPAQ06546 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.61■□□□□ 0.73
GABPAQ06546 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABPAQ06546 PCDHB18P-201ENST00000524813 2368 ntBASIC19.61■□□□□ 0.73
GABPAQ06546 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABPAQ06546 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GABPAQ06546 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.61■□□□□ 0.73
GABPAQ06546 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.61■□□□□ 0.73
GABPAQ06546 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.61■□□□□ 0.73
GABPAQ06546 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.61■□□□□ 0.73
GABPAQ06546 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GABPAQ06546 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.61■□□□□ 0.73
GABPAQ06546 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.61■□□□□ 0.73
GABPAQ06546 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms