Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 Z69720.1-201ENST00000601483 472 ntBASIC12.97□□□□□ -0.33
HIST1H1AQ02539 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 AL049757.1-201ENST00000616842 1596 ntBASIC12.97□□□□□ -0.33
HIST1H1AQ02539 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.97□□□□□ -0.33
HIST1H1AQ02539 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H1AQ02539 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 AC016734.2-201ENST00000624325 1377 ntBASIC12.96□□□□□ -0.33
HIST1H1AQ02539 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 C8orf49-201ENST00000525043 1968 ntBASIC12.96□□□□□ -0.33
HIST1H1AQ02539 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 AL603756.1-201ENST00000606511 2163 ntBASIC12.96□□□□□ -0.33
HIST1H1AQ02539 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 KLF4P1-201ENST00000412782 1185 ntBASIC12.96□□□□□ -0.33
HIST1H1AQ02539 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 AC091607.1-201ENST00000490318 1060 ntBASIC12.96□□□□□ -0.33
HIST1H1AQ02539 FAM86EP-206ENST00000510506 987 ntBASIC12.96□□□□□ -0.33
HIST1H1AQ02539 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 STK25P1-201ENST00000585406 838 ntBASIC12.96□□□□□ -0.33
HIST1H1AQ02539 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 AL590326.2-201ENST00000625139 305 ntBASIC12.96□□□□□ -0.33
HIST1H1AQ02539 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 AC067930.6-201ENST00000623257 4947 ntBASIC12.96□□□□□ -0.33
HIST1H1AQ02539 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H1AQ02539 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.96□□□□□ -0.34
HIST1H1AQ02539 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 IER3-202ENST00000376377 1350 ntBASIC12.95□□□□□ -0.34
HIST1H1AQ02539 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 AC007950.2-201ENST00000615045 2347 ntBASIC12.95□□□□□ -0.34
HIST1H1AQ02539 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H1AQ02539 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms