Protein–RNA interactions for Protein: Q01804

OTUD4, OTU domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4Q01804 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
OTUD4Q01804 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
OTUD4Q01804 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.42■□□□□ 0.38
OTUD4Q01804 CYP2T1P-202ENST00000641596 2535 ntBASIC17.42■□□□□ 0.38
OTUD4Q01804 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
OTUD4Q01804 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
OTUD4Q01804 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
OTUD4Q01804 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
OTUD4Q01804 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
OTUD4Q01804 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.41■□□□□ 0.38
OTUD4Q01804 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
OTUD4Q01804 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.41■□□□□ 0.38
OTUD4Q01804 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
OTUD4Q01804 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.41■□□□□ 0.38
OTUD4Q01804 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.41■□□□□ 0.38
OTUD4Q01804 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 PTCHD3P3-201ENST00000403073 906 ntBASIC17.41■□□□□ 0.38
OTUD4Q01804 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.41■□□□□ 0.38
OTUD4Q01804 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
OTUD4Q01804 SAPCD2P3-201ENST00000455031 850 ntBASIC17.41■□□□□ 0.38
OTUD4Q01804 AC087163.2-201ENST00000457299 853 ntBASIC17.41■□□□□ 0.38
OTUD4Q01804 SCARNA2-201ENST00000458748 420 ntBASIC17.41■□□□□ 0.38
OTUD4Q01804 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.41■□□□□ 0.38
OTUD4Q01804 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.41■□□□□ 0.38
OTUD4Q01804 AF238378.1-201ENST00000526806 358 ntBASIC17.41■□□□□ 0.38
OTUD4Q01804 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.41■□□□□ 0.38
OTUD4Q01804 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.41■□□□□ 0.38
OTUD4Q01804 AC021087.4-201ENST00000563761 564 ntBASIC17.41■□□□□ 0.38
OTUD4Q01804 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
OTUD4Q01804 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.41■□□□□ 0.38
OTUD4Q01804 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.41■□□□□ 0.38
OTUD4Q01804 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.41■□□□□ 0.38
OTUD4Q01804 AC012313.10-201ENST00000623509 926 ntBASIC17.41■□□□□ 0.38
OTUD4Q01804 AL139011.1-202ENST00000642063 584 ntBASIC17.41■□□□□ 0.38
OTUD4Q01804 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.41■□□□□ 0.38
OTUD4Q01804 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
OTUD4Q01804 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
OTUD4Q01804 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
OTUD4Q01804 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
OTUD4Q01804 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
OTUD4Q01804 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
OTUD4Q01804 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.4■□□□□ 0.38
OTUD4Q01804 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.4■□□□□ 0.38
OTUD4Q01804 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
OTUD4Q01804 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
OTUD4Q01804 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 AC005052.1-201ENST00000625181 2492 ntBASIC17.4■□□□□ 0.38
OTUD4Q01804 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.4■□□□□ 0.38
OTUD4Q01804 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.4■□□□□ 0.38
OTUD4Q01804 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.4■□□□□ 0.38
OTUD4Q01804 ELK2BP-201ENST00000415014 1224 ntBASIC17.4■□□□□ 0.38
OTUD4Q01804 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.4■□□□□ 0.38
OTUD4Q01804 KRT18P56-201ENST00000507275 550 ntBASIC17.4■□□□□ 0.38
OTUD4Q01804 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.4■□□□□ 0.38
OTUD4Q01804 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.4■□□□□ 0.38
OTUD4Q01804 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
OTUD4Q01804 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
OTUD4Q01804 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
OTUD4Q01804 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 AC006504.4-201ENST00000592118 1568 ntBASIC17.4■□□□□ 0.38
OTUD4Q01804 AC026691.1-201ENST00000602502 2017 ntBASIC17.4■□□□□ 0.38
OTUD4Q01804 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.4■□□□□ 0.38
OTUD4Q01804 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
OTUD4Q01804 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.4■□□□□ 0.38
OTUD4Q01804 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
OTUD4Q01804 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms