Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SCN7AQ01118 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN7AQ01118 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN7AQ01118 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SCN7AQ01118 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCN7AQ01118 DOC2GP-202ENST00000514950 1163 ntBASIC20.64■□□□□ 0.9
SCN7AQ01118 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.64■□□□□ 0.9
SCN7AQ01118 AC092337.1-201ENST00000568699 1129 ntBASIC20.64■□□□□ 0.9
SCN7AQ01118 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.64■□□□□ 0.9
SCN7AQ01118 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SCN7AQ01118 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN7AQ01118 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN7AQ01118 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.64■□□□□ 0.89
SCN7AQ01118 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN7AQ01118 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN7AQ01118 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN7AQ01118 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN7AQ01118 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN7AQ01118 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.64■□□□□ 0.89
SCN7AQ01118 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN7AQ01118 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.64■□□□□ 0.89
SCN7AQ01118 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN7AQ01118 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN7AQ01118 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN7AQ01118 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SCN7AQ01118 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN7AQ01118 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN7AQ01118 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
SCN7AQ01118 SRD5A3P1-201ENST00000603021 949 ntBASIC20.64■□□□□ 0.89
SCN7AQ01118 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.64■□□□□ 0.89
SCN7AQ01118 AC068880.1-201ENST00000507289 2297 ntBASIC20.63■□□□□ 0.89
SCN7AQ01118 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN7AQ01118 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SCN7AQ01118 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN7AQ01118 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.63■□□□□ 0.89
SCN7AQ01118 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN7AQ01118 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN7AQ01118 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN7AQ01118 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.63■□□□□ 0.89
SCN7AQ01118 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN7AQ01118 SNX29P1-201ENST00000548357 1007 ntBASIC20.63■□□□□ 0.89
SCN7AQ01118 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SCN7AQ01118 PCDHB17P-201ENST00000539533 2393 ntBASIC20.63■□□□□ 0.89
SCN7AQ01118 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN7AQ01118 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN7AQ01118 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN7AQ01118 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN7AQ01118 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN7AQ01118 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SCN7AQ01118 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN7AQ01118 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN7AQ01118 AL023806.1-201ENST00000603994 1649 ntBASIC20.62■□□□□ 0.89
SCN7AQ01118 AL031731.1-201ENST00000642131 2094 ntBASIC20.62■□□□□ 0.89
SCN7AQ01118 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN7AQ01118 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCN7AQ01118 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.62■□□□□ 0.89
SCN7AQ01118 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.62■□□□□ 0.89
SCN7AQ01118 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.62■□□□□ 0.89
SCN7AQ01118 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN7AQ01118 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
SCN7AQ01118 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.62■□□□□ 0.89
SCN7AQ01118 AC004461.2-201ENST00000629517 803 ntBASIC20.62■□□□□ 0.89
SCN7AQ01118 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.62■□□□□ 0.89
SCN7AQ01118 GPAA1P2-202ENST00000606848 1787 ntBASIC20.62■□□□□ 0.89
SCN7AQ01118 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN7AQ01118 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN7AQ01118 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SCN7AQ01118 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN7AQ01118 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN7AQ01118 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.62■□□□□ 0.89
SCN7AQ01118 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.62■□□□□ 0.89
SCN7AQ01118 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN7AQ01118 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN7AQ01118 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN7AQ01118 AC092068.3-201ENST00000587894 2016 ntBASIC20.61■□□□□ 0.89
SCN7AQ01118 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN7AQ01118 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN7AQ01118 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SCN7AQ01118 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN7AQ01118 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN7AQ01118 AC098850.1-201ENST00000419919 790 ntBASIC20.61■□□□□ 0.89
SCN7AQ01118 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.61■□□□□ 0.89
SCN7AQ01118 AC112492.5-201ENST00000421897 457 ntBASIC20.61■□□□□ 0.89
SCN7AQ01118 TPRX2P-201ENST00000535362 881 ntBASIC20.61■□□□□ 0.89
SCN7AQ01118 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.61■□□□□ 0.89
SCN7AQ01118 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN7AQ01118 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN7AQ01118 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN7AQ01118 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN7AQ01118 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN7AQ01118 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SCN7AQ01118 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms