Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.63■□□□□ 0.41
CBX1P83916 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.63■□□□□ 0.41
CBX1P83916 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.63■□□□□ 0.41
CBX1P83916 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CBX1P83916 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CBX1P83916 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CBX1P83916 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CBX1P83916 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 MIR600HG-201ENST00000449175 5984 ntBASIC17.63■□□□□ 0.41
CBX1P83916 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CBX1P83916 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CBX1P83916 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CBX1P83916 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CBX1P83916 LINC01101-201ENST00000622953 1884 ntBASIC17.63■□□□□ 0.41
CBX1P83916 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CBX1P83916 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.62■□□□□ 0.41
CBX1P83916 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.62■□□□□ 0.41
CBX1P83916 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.62■□□□□ 0.41
CBX1P83916 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CBX1P83916 AC016769.1-201ENST00000409132 1010 ntBASIC17.62■□□□□ 0.41
CBX1P83916 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.62■□□□□ 0.41
CBX1P83916 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.62■□□□□ 0.41
CBX1P83916 AL139327.4-201ENST00000612362 153 ntBASIC17.62■□□□□ 0.41
CBX1P83916 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.62■□□□□ 0.41
CBX1P83916 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CBX1P83916 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CBX1P83916 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.62■□□□□ 0.41
CBX1P83916 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC17.62■□□□□ 0.41
CBX1P83916 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.62■□□□□ 0.41
CBX1P83916 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.62■□□□□ 0.41
CBX1P83916 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CBX1P83916 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.62■□□□□ 0.41
CBX1P83916 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.62■□□□□ 0.41
CBX1P83916 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CBX1P83916 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CBX1P83916 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.62■□□□□ 0.41
CBX1P83916 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.61■□□□□ 0.41
CBX1P83916 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CBX1P83916 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CBX1P83916 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.61■□□□□ 0.41
CBX1P83916 AC007322.1-201ENST00000426983 750 ntBASIC17.61■□□□□ 0.41
CBX1P83916 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.61■□□□□ 0.41
CBX1P83916 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 AC231657.2-201ENST00000624556 255 ntBASIC17.61■□□□□ 0.41
CBX1P83916 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CBX1P83916 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CBX1P83916 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CBX1P83916 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CBX1P83916 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBX1P83916 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.61■□□□□ 0.41
CBX1P83916 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.6■□□□□ 0.41
CBX1P83916 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX1P83916 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX1P83916 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CBX1P83916 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CBX1P83916 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CBX1P83916 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX1P83916 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CBX1P83916 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX1P83916 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms