Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 AL359258.3-201ENST00000622910 2331 ntBASIC13.29□□□□□ -0.28
CCL20P78556 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCL20P78556 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL20P78556 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL20P78556 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 COX5BP2-201ENST00000392354 334 ntBASIC13.29□□□□□ -0.28
CCL20P78556 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCL20P78556 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.29□□□□□ -0.28
CCL20P78556 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 AC109462.3-201ENST00000573934 613 ntBASIC13.29□□□□□ -0.28
CCL20P78556 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL20P78556 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 AC019129.2-201ENST00000609837 1235 ntBASIC13.29□□□□□ -0.28
CCL20P78556 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCL20P78556 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL20P78556 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CCL20P78556 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 AC112504.1-201ENST00000623415 1841 ntBASIC13.29□□□□□ -0.28
CCL20P78556 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CCL20P78556 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL20P78556 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL20P78556 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL20P78556 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCL20P78556 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 AC139749.1-202ENST00000617529 3139 ntBASIC13.28□□□□□ -0.28
CCL20P78556 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL20P78556 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CCL20P78556 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.28□□□□□ -0.28
CCL20P78556 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL20P78556 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 RARRES2P6-201ENST00000567333 442 ntBASIC13.28□□□□□ -0.28
CCL20P78556 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL20P78556 MIR5787-201ENST00000611784 55 ntBASIC13.28□□□□□ -0.28
CCL20P78556 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 AC006486.2-201ENST00000624246 2199 ntBASIC13.28□□□□□ -0.28
CCL20P78556 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL20P78556 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL20P78556 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms