Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.62□□□□□ -0.23
CX3CL1P78423 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.62□□□□□ -0.23
CX3CL1P78423 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CX3CL1P78423 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.62□□□□□ -0.23
CX3CL1P78423 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.62□□□□□ -0.23
CX3CL1P78423 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.62□□□□□ -0.23
CX3CL1P78423 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.62□□□□□ -0.23
CX3CL1P78423 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.62□□□□□ -0.23
CX3CL1P78423 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.62□□□□□ -0.23
CX3CL1P78423 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.62□□□□□ -0.23
CX3CL1P78423 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.62□□□□□ -0.23
CX3CL1P78423 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CX3CL1P78423 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CX3CL1P78423 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.62□□□□□ -0.23
CX3CL1P78423 AL139424.1-201ENST00000607572 797 ntBASIC13.62□□□□□ -0.23
CX3CL1P78423 TP73-AS1-207ENST00000624167 988 ntBASIC13.62□□□□□ -0.23
CX3CL1P78423 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.62□□□□□ -0.23
CX3CL1P78423 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CX3CL1P78423 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.62□□□□□ -0.23
CX3CL1P78423 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CX3CL1P78423 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.62□□□□□ -0.23
CX3CL1P78423 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.62□□□□□ -0.23
CX3CL1P78423 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CX3CL1P78423 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CX3CL1P78423 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CX3CL1P78423 AC060834.1-201ENST00000443027 2032 ntBASIC13.61□□□□□ -0.23
CX3CL1P78423 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.61□□□□□ -0.23
CX3CL1P78423 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CL1P78423 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CL1P78423 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.61□□□□□ -0.23
CX3CL1P78423 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CX3CL1P78423 LAGE3P1-201ENST00000425356 484 ntBASIC13.61□□□□□ -0.23
CX3CL1P78423 RPS2P1-201ENST00000434010 821 ntBASIC13.61□□□□□ -0.23
CX3CL1P78423 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CL1P78423 AC079781.3-201ENST00000449110 356 ntBASIC13.61□□□□□ -0.23
CX3CL1P78423 AF186996.4-201ENST00000467186 377 ntBASIC13.61□□□□□ -0.23
CX3CL1P78423 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.61□□□□□ -0.23
CX3CL1P78423 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.61□□□□□ -0.23
CX3CL1P78423 OR7E14P-202ENST00000530490 1290 ntBASIC13.61□□□□□ -0.23
CX3CL1P78423 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CL1P78423 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CL1P78423 AC004706.3-202ENST00000621574 984 ntBASIC13.61□□□□□ -0.23
CX3CL1P78423 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.61□□□□□ -0.23
CX3CL1P78423 AC107918.4-202ENST00000641623 219 ntBASIC13.61□□□□□ -0.23
CX3CL1P78423 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CX3CL1P78423 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
CX3CL1P78423 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CX3CL1P78423 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CL1P78423 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.61□□□□□ -0.23
CX3CL1P78423 AL590787.1-201ENST00000568856 1315 ntBASIC13.61□□□□□ -0.23
CX3CL1P78423 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.61□□□□□ -0.23
CX3CL1P78423 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CX3CL1P78423 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CX3CL1P78423 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CX3CL1P78423 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CL1P78423 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CX3CL1P78423 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CL1P78423 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 KRT18P67-201ENST00000432816 1264 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms