Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.58■□□□□ 0.41
IRX4P78413 AC079776.2-201ENST00000641154 1609 ntBASIC17.58■□□□□ 0.41
IRX4P78413 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
IRX4P78413 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IRX4P78413 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
IRX4P78413 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
IRX4P78413 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
IRX4P78413 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
IRX4P78413 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX4P78413 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
IRX4P78413 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.58■□□□□ 0.4
IRX4P78413 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.58■□□□□ 0.4
IRX4P78413 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX4P78413 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.58■□□□□ 0.4
IRX4P78413 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.58■□□□□ 0.4
IRX4P78413 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
IRX4P78413 MIR4469-201ENST00000583919 79 ntBASIC17.58■□□□□ 0.4
IRX4P78413 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.58■□□□□ 0.4
IRX4P78413 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
IRX4P78413 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IRX4P78413 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX4P78413 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.58■□□□□ 0.4
IRX4P78413 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX4P78413 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX4P78413 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
IRX4P78413 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
IRX4P78413 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.58■□□□□ 0.4
IRX4P78413 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
IRX4P78413 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.57■□□□□ 0.4
IRX4P78413 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 AC073621.1-201ENST00000392730 636 ntBASIC17.57■□□□□ 0.4
IRX4P78413 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
IRX4P78413 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.57■□□□□ 0.4
IRX4P78413 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.57■□□□□ 0.4
IRX4P78413 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.57■□□□□ 0.4
IRX4P78413 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.57■□□□□ 0.4
IRX4P78413 YBX1P5-201ENST00000509441 847 ntBASIC17.57■□□□□ 0.4
IRX4P78413 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.57■□□□□ 0.4
IRX4P78413 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.57■□□□□ 0.4
IRX4P78413 AC006557.2-201ENST00000592985 1240 ntBASIC17.57■□□□□ 0.4
IRX4P78413 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.57■□□□□ 0.4
IRX4P78413 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.57■□□□□ 0.4
IRX4P78413 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.57■□□□□ 0.4
IRX4P78413 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 AC018695.7-201ENST00000624587 2492 ntBASIC17.57■□□□□ 0.4
IRX4P78413 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IRX4P78413 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.57■□□□□ 0.4
IRX4P78413 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
IRX4P78413 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.56■□□□□ 0.4
IRX4P78413 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
IRX4P78413 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
IRX4P78413 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
IRX4P78413 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 AC060834.1-201ENST00000443027 2032 ntBASIC17.56■□□□□ 0.4
IRX4P78413 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
IRX4P78413 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.56■□□□□ 0.4
IRX4P78413 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
IRX4P78413 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.56■□□□□ 0.4
IRX4P78413 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
IRX4P78413 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.56■□□□□ 0.4
IRX4P78413 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IRX4P78413 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms