Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM4P67936 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM4P67936 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.95■□□□□ 0.62
TPM4P67936 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM4P67936 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM4P67936 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM4P67936 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM4P67936 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TPM4P67936 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM4P67936 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM4P67936 MTHFR-217ENST00000641820 1569 ntBASIC18.94■□□□□ 0.62
TPM4P67936 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM4P67936 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.94■□□□□ 0.62
TPM4P67936 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM4P67936 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.94■□□□□ 0.62
TPM4P67936 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM4P67936 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.94■□□□□ 0.62
TPM4P67936 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.94■□□□□ 0.62
TPM4P67936 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.94■□□□□ 0.62
TPM4P67936 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.94■□□□□ 0.62
TPM4P67936 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.94■□□□□ 0.62
TPM4P67936 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TPM4P67936 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.94■□□□□ 0.62
TPM4P67936 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM4P67936 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.94■□□□□ 0.62
TPM4P67936 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM4P67936 ALOX12P2-203ENST00000570921 1945 ntBASIC18.94■□□□□ 0.62
TPM4P67936 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.94■□□□□ 0.62
TPM4P67936 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM4P67936 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TPM4P67936 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM4P67936 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.93■□□□□ 0.62
TPM4P67936 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
TPM4P67936 AC087499.1-201ENST00000418141 1075 ntBASIC18.93■□□□□ 0.62
TPM4P67936 TSPY5P-201ENST00000426936 936 ntBASIC18.93■□□□□ 0.62
TPM4P67936 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM4P67936 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM4P67936 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.93■□□□□ 0.62
TPM4P67936 AL592071.1-201ENST00000611956 408 ntBASIC18.93■□□□□ 0.62
TPM4P67936 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
TPM4P67936 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TPM4P67936 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM4P67936 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.93■□□□□ 0.62
TPM4P67936 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM4P67936 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TPM4P67936 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM4P67936 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.92■□□□□ 0.62
TPM4P67936 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.92■□□□□ 0.62
TPM4P67936 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TPM4P67936 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TPM4P67936 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TPM4P67936 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 RNF152P1-201ENST00000397754 604 ntBASIC18.92■□□□□ 0.62
TPM4P67936 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 AC117947.1-201ENST00000427448 529 ntBASIC18.92■□□□□ 0.62
TPM4P67936 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.92■□□□□ 0.62
TPM4P67936 KRT18P38-201ENST00000449496 1282 ntBASIC18.92■□□□□ 0.62
TPM4P67936 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 AC092647.4-201ENST00000457211 535 ntBASIC18.92■□□□□ 0.62
TPM4P67936 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 AC009533.2-201ENST00000543664 586 ntBASIC18.92■□□□□ 0.62
TPM4P67936 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms