Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.7■□□□□ 0.42
USP46P62068 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.7■□□□□ 0.42
USP46P62068 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.7■□□□□ 0.42
USP46P62068 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.7■□□□□ 0.42
USP46P62068 MPDU1-223ENST00000582151 728 ntBASIC17.7■□□□□ 0.42
USP46P62068 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
USP46P62068 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP46P62068 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.7■□□□□ 0.42
USP46P62068 AC027612.4-201ENST00000605371 583 ntBASIC17.7■□□□□ 0.42
USP46P62068 AC105339.1-204ENST00000636249 355 ntBASIC17.7■□□□□ 0.42
USP46P62068 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
USP46P62068 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
USP46P62068 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 KRT8P49-201ENST00000604166 1432 ntBASIC17.7■□□□□ 0.42
USP46P62068 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.7■□□□□ 0.42
USP46P62068 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
USP46P62068 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
USP46P62068 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
USP46P62068 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
USP46P62068 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 AL023806.1-201ENST00000603994 1649 ntBASIC17.69■□□□□ 0.42
USP46P62068 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
USP46P62068 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.69■□□□□ 0.42
USP46P62068 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
USP46P62068 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
USP46P62068 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 AL645608.8-201ENST00000606034 2086 ntBASIC17.69■□□□□ 0.42
USP46P62068 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
USP46P62068 AC002056.1-201ENST00000395613 760 ntBASIC17.69■□□□□ 0.42
USP46P62068 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.69■□□□□ 0.42
USP46P62068 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.69■□□□□ 0.42
USP46P62068 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.69■□□□□ 0.42
USP46P62068 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
USP46P62068 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 AC091167.2-201ENST00000579581 588 ntBASIC17.69■□□□□ 0.42
USP46P62068 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
USP46P62068 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.69■□□□□ 0.42
USP46P62068 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.69■□□□□ 0.42
USP46P62068 AL513210.1-201ENST00000629608 234 ntBASIC17.69■□□□□ 0.42
USP46P62068 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.69■□□□□ 0.42
USP46P62068 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.69■□□□□ 0.42
USP46P62068 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.69■□□□□ 0.42
USP46P62068 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
USP46P62068 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP46P62068 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.68■□□□□ 0.42
USP46P62068 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.68■□□□□ 0.42
USP46P62068 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.68■□□□□ 0.42
USP46P62068 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
USP46P62068 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP46P62068 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
USP46P62068 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 AC004461.1-201ENST00000412461 403 ntBASIC17.68■□□□□ 0.42
USP46P62068 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 AL355306.1-201ENST00000415580 579 ntBASIC17.68■□□□□ 0.42
USP46P62068 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.68■□□□□ 0.42
USP46P62068 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 AC124947.2-201ENST00000547118 1133 ntBASIC17.68■□□□□ 0.42
USP46P62068 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
USP46P62068 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.68■□□□□ 0.42
USP46P62068 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.68■□□□□ 0.42
USP46P62068 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.68■□□□□ 0.42
USP46P62068 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.68■□□□□ 0.42
USP46P62068 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP46P62068 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.68■□□□□ 0.42
USP46P62068 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP46P62068 AL162727.3-201ENST00000635661 2787 ntBASIC17.68■□□□□ 0.42
USP46P62068 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms