Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.83□□□□□ -0.04
SEC61A1P61619 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 KRT8P10-201ENST00000450021 1447 ntBASIC14.83□□□□□ -0.04
SEC61A1P61619 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.83□□□□□ -0.04
SEC61A1P61619 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SEC61A1P61619 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.83□□□□□ -0.04
SEC61A1P61619 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SEC61A1P61619 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SEC61A1P61619 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SEC61A1P61619 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SEC61A1P61619 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.82□□□□□ -0.04
SEC61A1P61619 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 AC092068.3-201ENST00000587894 2016 ntBASIC14.82□□□□□ -0.04
SEC61A1P61619 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SEC61A1P61619 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.82□□□□□ -0.04
SEC61A1P61619 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
SEC61A1P61619 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.82□□□□□ -0.04
SEC61A1P61619 AC132008.2-207ENST00000454517 770 ntBASIC14.82□□□□□ -0.04
SEC61A1P61619 SAPCD2P3-201ENST00000455031 850 ntBASIC14.82□□□□□ -0.04
SEC61A1P61619 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.82□□□□□ -0.04
SEC61A1P61619 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.82□□□□□ -0.04
SEC61A1P61619 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SEC61A1P61619 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.82□□□□□ -0.04
SEC61A1P61619 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SEC61A1P61619 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SEC61A1P61619 REXO1L11P-201ENST00000620964 1927 ntBASIC14.82□□□□□ -0.04
SEC61A1P61619 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SEC61A1P61619 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.82□□□□□ -0.04
SEC61A1P61619 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEC61A1P61619 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.81□□□□□ -0.04
SEC61A1P61619 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SEC61A1P61619 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.81□□□□□ -0.04
SEC61A1P61619 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SEC61A1P61619 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.81□□□□□ -0.04
SEC61A1P61619 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SEC61A1P61619 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.81□□□□□ -0.04
SEC61A1P61619 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.81□□□□□ -0.04
SEC61A1P61619 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.81□□□□□ -0.04
SEC61A1P61619 FDX1P1-201ENST00000449115 551 ntBASIC14.81□□□□□ -0.04
SEC61A1P61619 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.81□□□□□ -0.04
SEC61A1P61619 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.81□□□□□ -0.04
SEC61A1P61619 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SEC61A1P61619 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.81□□□□□ -0.04
SEC61A1P61619 AL121912.1-201ENST00000603683 238 ntBASIC14.81□□□□□ -0.04
SEC61A1P61619 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.81□□□□□ -0.04
SEC61A1P61619 INTS4P1-201ENST00000438455 1935 ntBASIC14.81□□□□□ -0.04
SEC61A1P61619 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.81□□□□□ -0.04
SEC61A1P61619 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.81□□□□□ -0.04
SEC61A1P61619 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.81□□□□□ -0.04
SEC61A1P61619 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 AC005915.1-201ENST00000624912 2018 ntBASIC14.81□□□□□ -0.04
SEC61A1P61619 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEC61A1P61619 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.81□□□□□ -0.04
SEC61A1P61619 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.81□□□□□ -0.04
SEC61A1P61619 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms