Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.26■■□□□ 1.15
ZC3H6P61129 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H6P61129 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC22.26■■□□□ 1.15
ZC3H6P61129 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H6P61129 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H6P61129 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
ZC3H6P61129 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ZC3H6P61129 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
ZC3H6P61129 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
ZC3H6P61129 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3H6P61129 RAB35-202ENST00000534951 939 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3H6P61129 RAB43P1-201ENST00000561790 589 ntBASIC22.25■■□□□ 1.15
ZC3H6P61129 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ZC3H6P61129 MIR6805-201ENST00000615055 62 ntBASIC22.25■■□□□ 1.15
ZC3H6P61129 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC22.25■■□□□ 1.15
ZC3H6P61129 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC22.25■■□□□ 1.15
ZC3H6P61129 AL354751.1-201ENST00000412768 1863 ntBASIC22.25■■□□□ 1.15
ZC3H6P61129 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
ZC3H6P61129 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3H6P61129 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H6P61129 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
ZC3H6P61129 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3H6P61129 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
ZC3H6P61129 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3H6P61129 AC116353.5-201ENST00000638148 1699 ntBASIC22.24■■□□□ 1.15
ZC3H6P61129 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
ZC3H6P61129 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
ZC3H6P61129 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 RN7SL618P-201ENST00000477850 296 ntBASIC22.24■■□□□ 1.15
ZC3H6P61129 AC011495.1-201ENST00000498085 584 ntBASIC22.24■■□□□ 1.15
ZC3H6P61129 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
ZC3H6P61129 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
ZC3H6P61129 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3H6P61129 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3H6P61129 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H6P61129 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H6P61129 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H6P61129 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H6P61129 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H6P61129 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H6P61129 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H6P61129 RPS19-201ENST00000221975 500 ntTSL 3 BASIC22.23■■□□□ 1.15
ZC3H6P61129 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H6P61129 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC22.23■■□□□ 1.15
ZC3H6P61129 RBM39-205ENST00000397370 612 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H6P61129 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
ZC3H6P61129 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
ZC3H6P61129 AC093004.1-201ENST00000508850 424 ntBASIC22.23■■□□□ 1.15
ZC3H6P61129 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H6P61129 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC22.23■■□□□ 1.15
ZC3H6P61129 QPRT-203ENST00000562473 579 ntTSL 3 BASIC22.23■■□□□ 1.15
ZC3H6P61129 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H6P61129 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC22.23■■□□□ 1.15
ZC3H6P61129 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
ZC3H6P61129 TEX48-202ENST00000612244 662 ntTSL 3 BASIC22.23■■□□□ 1.15
ZC3H6P61129 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC22.23■■□□□ 1.15
ZC3H6P61129 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H6P61129 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H6P61129 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H6P61129 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
ZC3H6P61129 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
ZC3H6P61129 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.22■■□□□ 1.15
ZC3H6P61129 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
ZC3H6P61129 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H6P61129 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ZC3H6P61129 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H6P61129 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ZC3H6P61129 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC22.22■■□□□ 1.15
ZC3H6P61129 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H6P61129 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC22.22■■□□□ 1.15
ZC3H6P61129 AC022210.1-201ENST00000449856 793 ntBASIC22.22■■□□□ 1.15
ZC3H6P61129 RN7SL837P-201ENST00000463010 287 ntBASIC22.22■■□□□ 1.15
ZC3H6P61129 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ZC3H6P61129 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC22.22■■□□□ 1.15
ZC3H6P61129 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC22.22■■□□□ 1.15
ZC3H6P61129 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC22.22■■□□□ 1.15
ZC3H6P61129 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC22.22■■□□□ 1.15
ZC3H6P61129 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H6P61129 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H6P61129 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms