Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.2□□□□□ -0.3
RAB5BP61020 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.2□□□□□ -0.3
RAB5BP61020 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB5BP61020 CICP23-201ENST00000605013 2741 ntBASIC13.2□□□□□ -0.3
RAB5BP61020 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB5BP61020 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB5BP61020 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RAB5BP61020 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
RAB5BP61020 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RAB5BP61020 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RAB5BP61020 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB5BP61020 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB5BP61020 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RAB5BP61020 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB5BP61020 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RAB5BP61020 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RAB5BP61020 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB5BP61020 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RAB5BP61020 AC027612.3-201ENST00000413684 1047 ntBASIC13.19□□□□□ -0.3
RAB5BP61020 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.19□□□□□ -0.3
RAB5BP61020 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.19□□□□□ -0.3
RAB5BP61020 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB5BP61020 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.19□□□□□ -0.3
RAB5BP61020 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB5BP61020 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB5BP61020 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RAB5BP61020 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB5BP61020 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB5BP61020 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAB5BP61020 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB5BP61020 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.19□□□□□ -0.3
RAB5BP61020 DMBT1P1-203ENST00000636837 4628 ntBASIC13.19□□□□□ -0.3
RAB5BP61020 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB5BP61020 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAB5BP61020 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RAB5BP61020 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5BP61020 AC073210.2-201ENST00000430369 194 ntBASIC13.18□□□□□ -0.3
RAB5BP61020 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5BP61020 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAB5BP61020 RAP2CP1-201ENST00000605103 478 ntBASIC13.18□□□□□ -0.3
RAB5BP61020 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.18□□□□□ -0.3
RAB5BP61020 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5BP61020 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.18□□□□□ -0.3
RAB5BP61020 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RAB5BP61020 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAB5BP61020 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms