Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH13P55290 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH13P55290 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDH13P55290 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH13P55290 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH13P55290 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH13P55290 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 CYP2T1P-202ENST00000641596 2535 ntBASIC16.51■□□□□ 0.23
CDH13P55290 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH13P55290 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH13P55290 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 PRYP5-201ENST00000451909 266 ntBASIC16.51■□□□□ 0.23
CDH13P55290 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.51■□□□□ 0.23
CDH13P55290 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.51■□□□□ 0.23
CDH13P55290 NKAPP1-205ENST00000585790 367 ntBASIC16.51■□□□□ 0.23
CDH13P55290 TERC-201ENST00000602385 541 ntBASIC16.51■□□□□ 0.23
CDH13P55290 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH13P55290 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH13P55290 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 LINC00895-201ENST00000629028 1637 ntBASIC16.51■□□□□ 0.23
CDH13P55290 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH13P55290 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH13P55290 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH13P55290 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH13P55290 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH13P55290 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH13P55290 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH13P55290 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 AC046158.3-201ENST00000624947 2558 ntBASIC16.5■□□□□ 0.23
CDH13P55290 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDH13P55290 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDH13P55290 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH13P55290 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH13P55290 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH13P55290 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDH13P55290 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH13P55290 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH13P55290 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH13P55290 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH13P55290 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH13P55290 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH13P55290 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 KRT8P49-201ENST00000604166 1432 ntBASIC16.5■□□□□ 0.23
CDH13P55290 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CDH13P55290 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH13P55290 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH13P55290 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH13P55290 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH13P55290 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH13P55290 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDH13P55290 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms