Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.53■□□□□ 0.56
PMS1P54277 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.53■□□□□ 0.56
PMS1P54277 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.53■□□□□ 0.56
PMS1P54277 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.53■□□□□ 0.56
PMS1P54277 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PMS1P54277 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
PMS1P54277 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.52■□□□□ 0.56
PMS1P54277 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PMS1P54277 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.52■□□□□ 0.56
PMS1P54277 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.52■□□□□ 0.56
PMS1P54277 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PMS1P54277 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PMS1P54277 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.52■□□□□ 0.56
PMS1P54277 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PMS1P54277 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.52■□□□□ 0.56
PMS1P54277 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.52■□□□□ 0.56
PMS1P54277 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
PMS1P54277 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PMS1P54277 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PMS1P54277 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.52■□□□□ 0.56
PMS1P54277 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PMS1P54277 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PMS1P54277 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.52■□□□□ 0.56
PMS1P54277 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.52■□□□□ 0.56
PMS1P54277 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.52■□□□□ 0.56
PMS1P54277 AC018712.1-201ENST00000455767 687 ntBASIC18.52■□□□□ 0.56
PMS1P54277 OR7E14P-202ENST00000530490 1290 ntBASIC18.52■□□□□ 0.56
PMS1P54277 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.52■□□□□ 0.56
PMS1P54277 AC006557.2-201ENST00000592985 1240 ntBASIC18.52■□□□□ 0.56
PMS1P54277 AL691432.3-201ENST00000621860 400 ntBASIC18.52■□□□□ 0.56
PMS1P54277 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.52■□□□□ 0.56
PMS1P54277 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.52■□□□□ 0.56
PMS1P54277 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PMS1P54277 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.52■□□□□ 0.56
PMS1P54277 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PMS1P54277 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PMS1P54277 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PMS1P54277 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PMS1P54277 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PMS1P54277 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PMS1P54277 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PMS1P54277 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.52■□□□□ 0.55
PMS1P54277 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PMS1P54277 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.55
PMS1P54277 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.52■□□□□ 0.55
PMS1P54277 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.52■□□□□ 0.55
PMS1P54277 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.52■□□□□ 0.55
PMS1P54277 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PMS1P54277 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.51■□□□□ 0.55
PMS1P54277 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PMS1P54277 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PMS1P54277 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.51■□□□□ 0.55
PMS1P54277 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PMS1P54277 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.51■□□□□ 0.55
PMS1P54277 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.51■□□□□ 0.55
PMS1P54277 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.51■□□□□ 0.55
PMS1P54277 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 GGT4P-201ENST00000623672 1708 ntBASIC18.51■□□□□ 0.55
PMS1P54277 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.51■□□□□ 0.55
PMS1P54277 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PMS1P54277 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PMS1P54277 CICP6-201ENST00000457191 2729 ntBASIC18.51■□□□□ 0.55
PMS1P54277 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PMS1P54277 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 GGT3P-204ENST00000453783 1664 ntBASIC18.5■□□□□ 0.55
PMS1P54277 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PMS1P54277 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 AL031731.1-201ENST00000642131 2094 ntBASIC18.5■□□□□ 0.55
PMS1P54277 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.5■□□□□ 0.55
PMS1P54277 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.5■□□□□ 0.55
PMS1P54277 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PMS1P54277 AC079781.3-201ENST00000449110 356 ntBASIC18.5■□□□□ 0.55
PMS1P54277 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.5■□□□□ 0.55
PMS1P54277 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PMS1P54277 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms