Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TSEN15P1-201ENST00000423257 515 ntBASIC17.27■□□□□ 0.36
ATXN3P54252 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ATXN3P54252 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
ATXN3P54252 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.27■□□□□ 0.36
ATXN3P54252 AC010654.1-201ENST00000615722 808 ntBASIC17.27■□□□□ 0.36
ATXN3P54252 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATXN3P54252 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.27■□□□□ 0.36
ATXN3P54252 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.27■□□□□ 0.36
ATXN3P54252 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATXN3P54252 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ATXN3P54252 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.27■□□□□ 0.35
ATXN3P54252 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.27■□□□□ 0.35
ATXN3P54252 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATXN3P54252 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATXN3P54252 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.27■□□□□ 0.35
ATXN3P54252 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATXN3P54252 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
ATXN3P54252 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATXN3P54252 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATXN3P54252 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATXN3P54252 AC132938.6-201ENST00000623828 1655 ntBASIC17.26■□□□□ 0.35
ATXN3P54252 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ATXN3P54252 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATXN3P54252 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATXN3P54252 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATXN3P54252 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATXN3P54252 COX5BP2-201ENST00000392354 334 ntBASIC17.26■□□□□ 0.35
ATXN3P54252 ACTG1P14-201ENST00000446382 1122 ntBASIC17.26■□□□□ 0.35
ATXN3P54252 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.26■□□□□ 0.35
ATXN3P54252 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATXN3P54252 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.26■□□□□ 0.35
ATXN3P54252 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ATXN3P54252 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.26■□□□□ 0.35
ATXN3P54252 AC239800.4-201ENST00000603712 296 ntBASIC17.26■□□□□ 0.35
ATXN3P54252 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATXN3P54252 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ATXN3P54252 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
ATXN3P54252 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
ATXN3P54252 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.26■□□□□ 0.35
ATXN3P54252 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.26■□□□□ 0.35
ATXN3P54252 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.26■□□□□ 0.35
ATXN3P54252 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ATXN3P54252 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATXN3P54252 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATXN3P54252 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.25■□□□□ 0.35
ATXN3P54252 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
ATXN3P54252 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ATXN3P54252 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ATXN3P54252 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.25■□□□□ 0.35
ATXN3P54252 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.25■□□□□ 0.35
ATXN3P54252 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATXN3P54252 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.25■□□□□ 0.35
ATXN3P54252 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.25■□□□□ 0.35
ATXN3P54252 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.25■□□□□ 0.35
ATXN3P54252 AC092474.2-201ENST00000424288 719 ntBASIC17.25■□□□□ 0.35
ATXN3P54252 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.25■□□□□ 0.35
ATXN3P54252 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.25■□□□□ 0.35
ATXN3P54252 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ATXN3P54252 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.25■□□□□ 0.35
ATXN3P54252 AP000344.2-201ENST00000512987 629 ntBASIC17.25■□□□□ 0.35
ATXN3P54252 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ATXN3P54252 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.25■□□□□ 0.35
ATXN3P54252 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.25■□□□□ 0.35
ATXN3P54252 PDPK2P-202ENST00000562415 1191 ntBASIC17.25■□□□□ 0.35
ATXN3P54252 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.25■□□□□ 0.35
ATXN3P54252 AC093028.1-201ENST00000622998 982 ntBASIC17.25■□□□□ 0.35
ATXN3P54252 AC004877.2-201ENST00000623941 599 ntBASIC17.25■□□□□ 0.35
ATXN3P54252 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.25■□□□□ 0.35
ATXN3P54252 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ATXN3P54252 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.25■□□□□ 0.35
ATXN3P54252 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.25■□□□□ 0.35
ATXN3P54252 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATXN3P54252 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
ATXN3P54252 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
ATXN3P54252 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.24■□□□□ 0.35
ATXN3P54252 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 AC003669.1-201ENST00000334569 611 ntBASIC17.24■□□□□ 0.35
ATXN3P54252 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms