Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.55■□□□□ 0.56
GPC3P51654 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.55■□□□□ 0.56
GPC3P51654 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
GPC3P51654 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.55■□□□□ 0.56
GPC3P51654 RFPL4AP1-201ENST00000530883 850 ntBASIC18.55■□□□□ 0.56
GPC3P51654 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.55■□□□□ 0.56
GPC3P51654 MPDU1-223ENST00000582151 728 ntBASIC18.55■□□□□ 0.56
GPC3P51654 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.55■□□□□ 0.56
GPC3P51654 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.55■□□□□ 0.56
GPC3P51654 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC3P51654 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.55■□□□□ 0.56
GPC3P51654 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GPC3P51654 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC3P51654 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
GPC3P51654 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC3P51654 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC3P51654 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC3P51654 KRT8P49-201ENST00000604166 1432 ntBASIC18.55■□□□□ 0.56
GPC3P51654 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GPC3P51654 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC3P51654 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GPC3P51654 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.55■□□□□ 0.56
GPC3P51654 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.54■□□□□ 0.56
GPC3P51654 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
GPC3P51654 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.54■□□□□ 0.56
GPC3P51654 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.54■□□□□ 0.56
GPC3P51654 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
GPC3P51654 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
GPC3P51654 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GPC3P51654 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
GPC3P51654 TFAMP1-201ENST00000412727 736 ntBASIC18.54■□□□□ 0.56
GPC3P51654 HMGN1P19-201ENST00000436976 333 ntBASIC18.54■□□□□ 0.56
GPC3P51654 SPDYE11-202ENST00000450699 704 ntBASIC18.54■□□□□ 0.56
GPC3P51654 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.54■□□□□ 0.56
GPC3P51654 AC023141.5-201ENST00000458585 616 ntBASIC18.54■□□□□ 0.56
GPC3P51654 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.54■□□□□ 0.56
GPC3P51654 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.54■□□□□ 0.56
GPC3P51654 AC109635.5-201ENST00000533593 962 ntBASIC18.54■□□□□ 0.56
GPC3P51654 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GPC3P51654 AC087641.1-201ENST00000557561 1021 ntBASIC18.54■□□□□ 0.56
GPC3P51654 AC093520.2-201ENST00000561830 333 ntBASIC18.54■□□□□ 0.56
GPC3P51654 RARRES2P8-201ENST00000566335 367 ntBASIC18.54■□□□□ 0.56
GPC3P51654 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.54■□□□□ 0.56
GPC3P51654 SPDYE9P-201ENST00000570642 692 ntBASIC18.54■□□□□ 0.56
GPC3P51654 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 SPDYE10P-202ENST00000612005 668 ntBASIC18.54■□□□□ 0.56
GPC3P51654 SPDYE8P-202ENST00000612377 668 ntBASIC18.54■□□□□ 0.56
GPC3P51654 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.54■□□□□ 0.56
GPC3P51654 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GPC3P51654 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
GPC3P51654 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GPC3P51654 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GPC3P51654 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GPC3P51654 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC3P51654 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.53■□□□□ 0.56
GPC3P51654 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GPC3P51654 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.53■□□□□ 0.56
GPC3P51654 RNU1-129P-201ENST00000384064 167 ntBASIC18.53■□□□□ 0.56
GPC3P51654 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.53■□□□□ 0.56
GPC3P51654 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC3P51654 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.53■□□□□ 0.56
GPC3P51654 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.53■□□□□ 0.56
GPC3P51654 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC3P51654 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
GPC3P51654 AC243562.1-201ENST00000560672 389 ntBASIC18.53■□□□□ 0.56
GPC3P51654 AL135744.1-201ENST00000565098 629 ntBASIC18.53■□□□□ 0.56
GPC3P51654 U1.21-201ENST00000580816 167 ntBASIC18.53■□□□□ 0.56
GPC3P51654 AL161645.1-201ENST00000622716 1255 ntBASIC18.53■□□□□ 0.56
GPC3P51654 AC131009.4-201ENST00000624048 1740 ntBASIC18.53■□□□□ 0.56
GPC3P51654 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GPC3P51654 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC3P51654 AD000864.1-201ENST00000624076 2295 ntBASIC18.53■□□□□ 0.56
GPC3P51654 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC3P51654 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.53■□□□□ 0.56
GPC3P51654 AL021920.2-201ENST00000624828 1351 ntBASIC18.53■□□□□ 0.56
GPC3P51654 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GPC3P51654 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GPC3P51654 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms