Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
BRCA2P51587 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
BRCA2P51587 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCA2P51587 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
BRCA2P51587 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCA2P51587 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.56■□□□□ 0.56
BRCA2P51587 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.56■□□□□ 0.56
BRCA2P51587 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.56■□□□□ 0.56
BRCA2P51587 WFDC1-204ENST00000613603 549 ntBASIC18.56■□□□□ 0.56
BRCA2P51587 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCA2P51587 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCA2P51587 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.56■□□□□ 0.56
BRCA2P51587 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
BRCA2P51587 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCA2P51587 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRCA2P51587 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
BRCA2P51587 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.55■□□□□ 0.56
BRCA2P51587 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BRCA2P51587 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.55■□□□□ 0.56
BRCA2P51587 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.55■□□□□ 0.56
BRCA2P51587 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.55■□□□□ 0.56
BRCA2P51587 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BRCA2P51587 AC093726.1-201ENST00000608064 963 ntBASIC18.55■□□□□ 0.56
BRCA2P51587 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.55■□□□□ 0.56
BRCA2P51587 NOC2LP1-202ENST00000452600 2235 ntBASIC18.55■□□□□ 0.56
BRCA2P51587 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.55■□□□□ 0.56
BRCA2P51587 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.55■□□□□ 0.56
BRCA2P51587 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.55■□□□□ 0.56
BRCA2P51587 AL033527.5-201ENST00000641382 801 ntBASIC18.55■□□□□ 0.56
BRCA2P51587 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
BRCA2P51587 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
BRCA2P51587 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 BRWD1P1-201ENST00000401091 371 ntBASIC18.55■□□□□ 0.56
BRCA2P51587 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.55■□□□□ 0.56
BRCA2P51587 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.55■□□□□ 0.56
BRCA2P51587 AC123567.1-201ENST00000548294 1261 ntBASIC18.55■□□□□ 0.56
BRCA2P51587 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.55■□□□□ 0.56
BRCA2P51587 AC133552.6-201ENST00000613406 534 ntBASIC18.55■□□□□ 0.56
BRCA2P51587 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.55■□□□□ 0.56
BRCA2P51587 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCA2P51587 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRCA2P51587 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.54■□□□□ 0.56
BRCA2P51587 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
BRCA2P51587 AC005229.1-201ENST00000392885 409 ntBASIC18.54■□□□□ 0.56
BRCA2P51587 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRCA2P51587 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.54■□□□□ 0.56
BRCA2P51587 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.54■□□□□ 0.56
BRCA2P51587 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.54■□□□□ 0.56
BRCA2P51587 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.54■□□□□ 0.56
BRCA2P51587 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
BRCA2P51587 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRCA2P51587 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.54■□□□□ 0.56
BRCA2P51587 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.54■□□□□ 0.56
BRCA2P51587 GPAA1P2-201ENST00000417923 928 ntBASIC18.54■□□□□ 0.56
BRCA2P51587 AL589987.1-201ENST00000453380 819 ntBASIC18.54■□□□□ 0.56
BRCA2P51587 AC105129.2-201ENST00000559536 390 ntBASIC18.54■□□□□ 0.56
BRCA2P51587 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRCA2P51587 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.54■□□□□ 0.56
BRCA2P51587 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRCA2P51587 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRCA2P51587 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRCA2P51587 PRYP6-201ENST00000514804 343 ntBASIC18.54■□□□□ 0.56
BRCA2P51587 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
BRCA2P51587 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BRCA2P51587 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRCA2P51587 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.53■□□□□ 0.56
BRCA2P51587 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BRCA2P51587 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.53■□□□□ 0.56
BRCA2P51587 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.53■□□□□ 0.56
BRCA2P51587 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
BRCA2P51587 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRCA2P51587 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.53■□□□□ 0.56
BRCA2P51587 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms