Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC006277.1-201ENST00000624348 1610 ntBASIC18.52■□□□□ 0.56
CPT1AP50416 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CPT1AP50416 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.52■□□□□ 0.56
CPT1AP50416 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CPT1AP50416 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.52■□□□□ 0.56
CPT1AP50416 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 AP005018.1-201ENST00000525475 301 ntBASIC18.52■□□□□ 0.56
CPT1AP50416 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.52■□□□□ 0.56
CPT1AP50416 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.52■□□□□ 0.56
CPT1AP50416 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
CPT1AP50416 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.52■□□□□ 0.56
CPT1AP50416 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CPT1AP50416 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.52■□□□□ 0.56
CPT1AP50416 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.52■□□□□ 0.56
CPT1AP50416 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPT1AP50416 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPT1AP50416 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPT1AP50416 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CPT1AP50416 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CPT1AP50416 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPT1AP50416 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPT1AP50416 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPT1AP50416 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPT1AP50416 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.52■□□□□ 0.55
CPT1AP50416 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CPT1AP50416 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.51■□□□□ 0.55
CPT1AP50416 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.51■□□□□ 0.55
CPT1AP50416 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CPT1AP50416 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.51■□□□□ 0.55
CPT1AP50416 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.51■□□□□ 0.55
CPT1AP50416 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.51■□□□□ 0.55
CPT1AP50416 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.51■□□□□ 0.55
CPT1AP50416 AC098859.1-201ENST00000502915 1238 ntBASIC18.51■□□□□ 0.55
CPT1AP50416 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.51■□□□□ 0.55
CPT1AP50416 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.51■□□□□ 0.55
CPT1AP50416 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.51■□□□□ 0.55
CPT1AP50416 SPDYE22P-201ENST00000582158 798 ntBASIC18.51■□□□□ 0.55
CPT1AP50416 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.51■□□□□ 0.55
CPT1AP50416 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.51■□□□□ 0.55
CPT1AP50416 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CPT1AP50416 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CPT1AP50416 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CPT1AP50416 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CPT1AP50416 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPT1AP50416 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.51■□□□□ 0.55
CPT1AP50416 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.51■□□□□ 0.55
CPT1AP50416 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.51■□□□□ 0.55
CPT1AP50416 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.51■□□□□ 0.55
CPT1AP50416 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.5■□□□□ 0.55
CPT1AP50416 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.5■□□□□ 0.55
CPT1AP50416 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 CETN4P-206ENST00000642099 2168 ntBASIC18.5■□□□□ 0.55
CPT1AP50416 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CPT1AP50416 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.5■□□□□ 0.55
CPT1AP50416 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CPT1AP50416 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.5■□□□□ 0.55
CPT1AP50416 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CPT1AP50416 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.5■□□□□ 0.55
CPT1AP50416 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.5■□□□□ 0.55
CPT1AP50416 AL662799.1-202ENST00000614205 422 ntBASIC18.5■□□□□ 0.55
CPT1AP50416 AC025048.6-201ENST00000634326 1161 ntBASIC18.5■□□□□ 0.55
CPT1AP50416 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.5■□□□□ 0.55
CPT1AP50416 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CPT1AP50416 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPT1AP50416 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms