Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MMP13P45452 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
MMP13P45452 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.56■□□□□ 0.4
MMP13P45452 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 EGFEM1P-202ENST00000431685 1563 ntBASIC17.56■□□□□ 0.4
MMP13P45452 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MMP13P45452 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.56■□□□□ 0.4
MMP13P45452 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.55■□□□□ 0.4
MMP13P45452 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
MMP13P45452 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 AC079328.2-201ENST00000561241 3354 ntBASIC17.55■□□□□ 0.4
MMP13P45452 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MMP13P45452 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 AF186996.4-201ENST00000467186 377 ntBASIC17.55■□□□□ 0.4
MMP13P45452 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MMP13P45452 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.55■□□□□ 0.4
MMP13P45452 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.55■□□□□ 0.4
MMP13P45452 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.55■□□□□ 0.4
MMP13P45452 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.55■□□□□ 0.4
MMP13P45452 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.55■□□□□ 0.4
MMP13P45452 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MMP13P45452 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
MMP13P45452 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.55■□□□□ 0.4
MMP13P45452 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MMP13P45452 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.55■□□□□ 0.4
MMP13P45452 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MMP13P45452 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.54■□□□□ 0.4
MMP13P45452 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
MMP13P45452 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MMP13P45452 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MMP13P45452 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
MMP13P45452 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.54■□□□□ 0.4
MMP13P45452 LAGE3P1-201ENST00000425356 484 ntBASIC17.54■□□□□ 0.4
MMP13P45452 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MMP13P45452 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.54■□□□□ 0.4
MMP13P45452 KRT18P67-201ENST00000432816 1264 ntBASIC17.54■□□□□ 0.4
MMP13P45452 RPS2P1-201ENST00000434010 821 ntBASIC17.54■□□□□ 0.4
MMP13P45452 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.54■□□□□ 0.4
MMP13P45452 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MMP13P45452 AP002469.2-201ENST00000531724 424 ntBASIC17.54■□□□□ 0.4
MMP13P45452 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MMP13P45452 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.54■□□□□ 0.4
MMP13P45452 AC104692.2-201ENST00000603054 253 ntBASIC17.54■□□□□ 0.4
MMP13P45452 AL353135.1-201ENST00000606729 504 ntBASIC17.54■□□□□ 0.4
MMP13P45452 AL139424.1-201ENST00000607572 797 ntBASIC17.54■□□□□ 0.4
MMP13P45452 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.54■□□□□ 0.4
MMP13P45452 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.54■□□□□ 0.4
MMP13P45452 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
MMP13P45452 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MMP13P45452 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MMP13P45452 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.54■□□□□ 0.4
MMP13P45452 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.54■□□□□ 0.4
MMP13P45452 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MMP13P45452 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP13P45452 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
MMP13P45452 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP13P45452 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.53■□□□□ 0.4
MMP13P45452 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
MMP13P45452 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP13P45452 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.53■□□□□ 0.4
MMP13P45452 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MMP13P45452 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms