Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA4P43681 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.99■□□□□ 0.31
CHRNA4P43681 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 AC013467.2-201ENST00000605472 835 ntBASIC16.99■□□□□ 0.31
CHRNA4P43681 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA4P43681 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.99■□□□□ 0.31
CHRNA4P43681 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA4P43681 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHRNA4P43681 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA4P43681 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CHRNA4P43681 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 PCDHB19P-201ENST00000570871 2371 ntBASIC16.99■□□□□ 0.31
CHRNA4P43681 AC131009.4-201ENST00000624048 1740 ntBASIC16.99■□□□□ 0.31
CHRNA4P43681 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA4P43681 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA4P43681 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CHRNA4P43681 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 AC129492.6-201ENST00000611383 1305 ntBASIC16.98■□□□□ 0.31
CHRNA4P43681 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA4P43681 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA4P43681 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA4P43681 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHRNA4P43681 AC026396.1-201ENST00000419388 421 ntBASIC16.98■□□□□ 0.31
CHRNA4P43681 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA4P43681 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.98■□□□□ 0.31
CHRNA4P43681 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.98■□□□□ 0.31
CHRNA4P43681 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.98■□□□□ 0.31
CHRNA4P43681 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.98■□□□□ 0.31
CHRNA4P43681 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA4P43681 ACTL9-202ENST00000612068 1252 ntBASIC16.98■□□□□ 0.31
CHRNA4P43681 AC010654.1-201ENST00000615722 808 ntBASIC16.98■□□□□ 0.31
CHRNA4P43681 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.98■□□□□ 0.31
CHRNA4P43681 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 AL662844.4-201ENST00000606367 2838 ntBASIC16.98■□□□□ 0.31
CHRNA4P43681 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA4P43681 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CHRNA4P43681 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.98■□□□□ 0.31
CHRNA4P43681 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRNA4P43681 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRNA4P43681 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CHRNA4P43681 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRNA4P43681 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 AC104109.2-201ENST00000602919 1418 ntBASIC16.97■□□□□ 0.31
CHRNA4P43681 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRNA4P43681 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CHRNA4P43681 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRNA4P43681 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 IGLL3P-201ENST00000412472 434 ntBASIC16.97■□□□□ 0.31
CHRNA4P43681 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.97■□□□□ 0.31
CHRNA4P43681 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRNA4P43681 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRNA4P43681 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA4P43681 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHRNA4P43681 PCDH8P1-201ENST00000428983 2773 ntBASIC16.97■□□□□ 0.31
CHRNA4P43681 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRNA4P43681 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRNA4P43681 IL9RP2-201ENST00000423948 1312 ntBASIC16.96■□□□□ 0.31
CHRNA4P43681 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA4P43681 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRNA4P43681 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CHRNA4P43681 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms