Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC1A1P43005 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC1A1P43005 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC1A1P43005 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.63■□□□□ 0.41
SLC1A1P43005 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.63■□□□□ 0.41
SLC1A1P43005 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
SLC1A1P43005 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC1A1P43005 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC1A1P43005 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SLC1A1P43005 LINC01711-201ENST00000598340 967 ntBASIC17.63■□□□□ 0.41
SLC1A1P43005 AL805961.1-202ENST00000641562 540 ntBASIC17.63■□□□□ 0.41
SLC1A1P43005 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SLC1A1P43005 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SLC1A1P43005 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLC1A1P43005 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC1A1P43005 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC1A1P43005 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SLC1A1P43005 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC1A1P43005 AC092364.2-201ENST00000596710 2692 ntBASIC17.62■□□□□ 0.41
SLC1A1P43005 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 LAGE3P1-201ENST00000425356 484 ntBASIC17.62■□□□□ 0.41
SLC1A1P43005 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC1A1P43005 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 PRELID1P1-202ENST00000567272 903 ntBASIC17.62■□□□□ 0.41
SLC1A1P43005 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC1A1P43005 AC006557.2-201ENST00000592985 1240 ntBASIC17.62■□□□□ 0.41
SLC1A1P43005 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 AC025062.2-201ENST00000605477 670 ntBASIC17.62■□□□□ 0.41
SLC1A1P43005 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
SLC1A1P43005 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC1A1P43005 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC1A1P43005 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC1A1P43005 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC1A1P43005 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC1A1P43005 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC1A1P43005 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC1A1P43005 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC1A1P43005 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC1A1P43005 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SLC1A1P43005 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC1A1P43005 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC1A1P43005 SAPCD2P3-201ENST00000455031 850 ntBASIC17.61■□□□□ 0.41
SLC1A1P43005 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC1A1P43005 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC1A1P43005 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC1A1P43005 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC1A1P43005 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.61■□□□□ 0.41
SLC1A1P43005 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC1A1P43005 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC1A1P43005 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
SLC1A1P43005 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC1A1P43005 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SLC1A1P43005 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC1A1P43005 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC1A1P43005 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC1A1P43005 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms