Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.17■□□□□ 0.5
TNFSF9P41273 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.17■□□□□ 0.5
TNFSF9P41273 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.17■□□□□ 0.5
TNFSF9P41273 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TNFSF9P41273 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.17■□□□□ 0.5
TNFSF9P41273 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.17■□□□□ 0.5
TNFSF9P41273 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.17■□□□□ 0.5
TNFSF9P41273 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TNFSF9P41273 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TNFSF9P41273 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFSF9P41273 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFSF9P41273 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.17■□□□□ 0.5
TNFSF9P41273 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFSF9P41273 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TNFSF9P41273 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFSF9P41273 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TNFSF9P41273 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFSF9P41273 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFSF9P41273 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TNFSF9P41273 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.16■□□□□ 0.5
TNFSF9P41273 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFSF9P41273 UBALD1-205ENST00000590891 2641 ntBASIC18.16■□□□□ 0.5
TNFSF9P41273 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFSF9P41273 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 AL355306.1-201ENST00000415580 579 ntBASIC18.16■□□□□ 0.5
TNFSF9P41273 AC092474.2-201ENST00000424288 719 ntBASIC18.16■□□□□ 0.5
TNFSF9P41273 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
TNFSF9P41273 AC109635.5-201ENST00000533593 962 ntBASIC18.16■□□□□ 0.5
TNFSF9P41273 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFSF9P41273 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFSF9P41273 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.16■□□□□ 0.5
TNFSF9P41273 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
TNFSF9P41273 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFSF9P41273 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TNFSF9P41273 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TNFSF9P41273 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TNFSF9P41273 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TNFSF9P41273 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
TNFSF9P41273 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFSF9P41273 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.16■□□□□ 0.5
TNFSF9P41273 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFSF9P41273 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFSF9P41273 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TNFSF9P41273 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TNFSF9P41273 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.15■□□□□ 0.5
TNFSF9P41273 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.15■□□□□ 0.5
TNFSF9P41273 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 AD000864.1-201ENST00000624076 2295 ntBASIC18.15■□□□□ 0.5
TNFSF9P41273 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TNFSF9P41273 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 DNAJB3-202ENST00000449667 1266 ntBASIC18.15■□□□□ 0.5
TNFSF9P41273 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TNFSF9P41273 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TNFSF9P41273 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.15■□□□□ 0.5
TNFSF9P41273 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.15■□□□□ 0.5
TNFSF9P41273 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TNFSF9P41273 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.15■□□□□ 0.5
TNFSF9P41273 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TNFSF9P41273 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TNFSF9P41273 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.15■□□□□ 0.5
TNFSF9P41273 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF9P41273 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TNFSF9P41273 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.14■□□□□ 0.5
TNFSF9P41273 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.14■□□□□ 0.5
TNFSF9P41273 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TNFSF9P41273 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
TNFSF9P41273 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.14■□□□□ 0.49
TNFSF9P41273 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF9P41273 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFSF9P41273 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF9P41273 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TNFSF9P41273 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF9P41273 AC011676.5-201ENST00000624864 2660 ntBASIC18.14■□□□□ 0.49
TNFSF9P41273 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF9P41273 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF9P41273 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
TNFSF9P41273 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms