Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.27■■□□□ 1
ATP6V1AP38606 AC098859.1-201ENST00000502915 1238 ntBASIC21.27■■□□□ 1
ATP6V1AP38606 RNA5SP410-201ENST00000516285 106 ntBASIC21.27■■□□□ 1
ATP6V1AP38606 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.27■■□□□ 1
ATP6V1AP38606 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.27■■□□□ 1
ATP6V1AP38606 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.27■■□□□ 1
ATP6V1AP38606 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
ATP6V1AP38606 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V1AP38606 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.27■■□□□ 1
ATP6V1AP38606 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ATP6V1AP38606 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V1AP38606 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP6V1AP38606 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.27■■□□□ 1
ATP6V1AP38606 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.27■■□□□ 1
ATP6V1AP38606 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V1AP38606 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.27■□□□□ 0.99
ATP6V1AP38606 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP6V1AP38606 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
ATP6V1AP38606 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V1AP38606 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V1AP38606 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V1AP38606 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V1AP38606 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V1AP38606 AL080243.2-201ENST00000418783 582 ntBASIC21.26■□□□□ 0.99
ATP6V1AP38606 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 AC104794.3-201ENST00000566840 1248 ntBASIC21.26■□□□□ 0.99
ATP6V1AP38606 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V1AP38606 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V1AP38606 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V1AP38606 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V1AP38606 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP6V1AP38606 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 AC135050.7-201ENST00000624508 2218 ntBASIC21.25■□□□□ 0.99
ATP6V1AP38606 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 DFFBP1-201ENST00000433250 979 ntBASIC21.25■□□□□ 0.99
ATP6V1AP38606 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V1AP38606 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ATP6V1AP38606 AL671710.1-201ENST00000610245 2349 ntBASIC21.24■□□□□ 0.99
ATP6V1AP38606 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP6V1AP38606 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
ATP6V1AP38606 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP6V1AP38606 AC132938.2-201ENST00000579188 680 ntBASIC21.24■□□□□ 0.99
ATP6V1AP38606 AL591163.1-201ENST00000641757 987 ntBASIC21.24■□□□□ 0.99
ATP6V1AP38606 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 BTBD7P1-201ENST00000447253 1453 ntBASIC21.24■□□□□ 0.99
ATP6V1AP38606 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V1AP38606 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms