Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.47■□□□□ 0.39
SCNN1AP37088 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.47■□□□□ 0.39
SCNN1AP37088 AC020765.3-201ENST00000613051 740 ntBASIC17.47■□□□□ 0.39
SCNN1AP37088 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCNN1AP37088 GPAA1P2-202ENST00000606848 1787 ntBASIC17.47■□□□□ 0.39
SCNN1AP37088 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCNN1AP37088 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCNN1AP37088 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCNN1AP37088 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.47■□□□□ 0.39
SCNN1AP37088 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCNN1AP37088 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.46■□□□□ 0.39
SCNN1AP37088 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.46■□□□□ 0.39
SCNN1AP37088 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.46■□□□□ 0.39
SCNN1AP37088 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.46■□□□□ 0.39
SCNN1AP37088 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.46■□□□□ 0.39
SCNN1AP37088 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.46■□□□□ 0.39
SCNN1AP37088 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.46■□□□□ 0.39
SCNN1AP37088 AC074386.1-202ENST00000463561 864 ntBASIC17.46■□□□□ 0.39
SCNN1AP37088 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.46■□□□□ 0.39
SCNN1AP37088 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
SCNN1AP37088 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCNN1AP37088 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.46■□□□□ 0.39
SCNN1AP37088 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCNN1AP37088 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCNN1AP37088 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCNN1AP37088 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
SCNN1AP37088 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCNN1AP37088 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.46■□□□□ 0.38
SCNN1AP37088 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCNN1AP37088 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCNN1AP37088 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCNN1AP37088 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.45■□□□□ 0.38
SCNN1AP37088 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.45■□□□□ 0.38
SCNN1AP37088 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCNN1AP37088 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SCNN1AP37088 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.45■□□□□ 0.38
SCNN1AP37088 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.45■□□□□ 0.38
SCNN1AP37088 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCNN1AP37088 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.45■□□□□ 0.38
SCNN1AP37088 PGAM5P1-201ENST00000518923 814 ntBASIC17.45■□□□□ 0.38
SCNN1AP37088 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.45■□□□□ 0.38
SCNN1AP37088 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.45■□□□□ 0.38
SCNN1AP37088 AC040169.1-201ENST00000565382 521 ntBASIC17.45■□□□□ 0.38
SCNN1AP37088 AC068137.2-201ENST00000605408 478 ntBASIC17.45■□□□□ 0.38
SCNN1AP37088 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SCNN1AP37088 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.45■□□□□ 0.38
SCNN1AP37088 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SCNN1AP37088 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SCNN1AP37088 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCNN1AP37088 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SCNN1AP37088 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SCNN1AP37088 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.45■□□□□ 0.38
SCNN1AP37088 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCNN1AP37088 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.44■□□□□ 0.38
SCNN1AP37088 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCNN1AP37088 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCNN1AP37088 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
SCNN1AP37088 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SCNN1AP37088 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SCNN1AP37088 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.44■□□□□ 0.38
SCNN1AP37088 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SCNN1AP37088 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SCNN1AP37088 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCNN1AP37088 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCNN1AP37088 AC092474.2-201ENST00000424288 719 ntBASIC17.44■□□□□ 0.38
SCNN1AP37088 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SCNN1AP37088 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.44■□□□□ 0.38
SCNN1AP37088 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SCNN1AP37088 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms