Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC243562.1-201ENST00000560672 389 ntBASIC17.23■□□□□ 0.35
SLC6A4P31645 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC6A4P31645 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC6A4P31645 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC6A4P31645 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC6A4P31645 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.23■□□□□ 0.35
SLC6A4P31645 AL161645.1-201ENST00000622716 1255 ntBASIC17.23■□□□□ 0.35
SLC6A4P31645 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A4P31645 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A4P31645 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC6A4P31645 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A4P31645 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A4P31645 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A4P31645 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC6A4P31645 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A4P31645 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC6A4P31645 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC6A4P31645 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
SLC6A4P31645 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SLC6A4P31645 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A4P31645 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC6A4P31645 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC6A4P31645 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A4P31645 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC6A4P31645 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC6A4P31645 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC6A4P31645 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC6A4P31645 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC6A4P31645 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLC6A4P31645 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC6A4P31645 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC6A4P31645 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC6A4P31645 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC6A4P31645 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 AC022211.2-201ENST00000585075 2527 ntBASIC17.22■□□□□ 0.35
SLC6A4P31645 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A4P31645 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC6A4P31645 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC6A4P31645 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A4P31645 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC6A4P31645 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC6A4P31645 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SLC6A4P31645 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SLC6A4P31645 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 RNF216P1-203ENST00000404404 2427 ntBASIC17.21■□□□□ 0.35
SLC6A4P31645 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SLC6A4P31645 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 AC016027.1-202ENST00000607927 1699 ntBASIC17.21■□□□□ 0.35
SLC6A4P31645 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 SPDYE11-202ENST00000450699 704 ntBASIC17.21■□□□□ 0.35
SLC6A4P31645 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC6A4P31645 AC079140.1-201ENST00000508039 487 ntBASIC17.21■□□□□ 0.35
SLC6A4P31645 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A4P31645 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SLC6A4P31645 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SLC6A4P31645 SPDYE9P-201ENST00000570642 692 ntBASIC17.21■□□□□ 0.35
SLC6A4P31645 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A4P31645 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC6A4P31645 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC6A4P31645 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC6A4P31645 SPDYE10P-202ENST00000612005 668 ntBASIC17.21■□□□□ 0.35
SLC6A4P31645 SPDYE8P-202ENST00000612377 668 ntBASIC17.21■□□□□ 0.35
SLC6A4P31645 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms